CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLTA (Malate dehydrogenase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=mdh PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 85/214 (39.72%), Postives = 121/214 (56.54%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M + V V VTG GQI Y+ + +A G + G D + L + DIP AL+GV+MEL D AFPL++ V TT +A G++ A ++G PR G+ER+D++ KN I+ Q AL A + K+ VV NP NTN I AP + KN + RLD NR +S + V +S V V++WGNHS+ Q PD A +N ++P+ E + Sbjct: 1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGVERRDLLKKNGEIFATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETI 210
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLT2 (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=mdh PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 86/214 (40.19%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M + V V VTG GQI Y+ + +A G + G D + L + DIP AL+GV+MEL D AFPL++ V TT +A G++ A ++G PR GMER+D++ KN I Q AL A + K+ VV NP NTN I AP + KN + RLD NR +S + V +S V V++WGNHS+ Q PD A +N ++P+ E + Sbjct: 1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIVATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETI 210
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MAGSM (Malate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=mdh PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39 Identity = 92/211 (43.60%), Postives = 127/211 (60.19%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 +P+RV VTGAAGQI Y+L+ +A G + G D+ V L +L+IP A L GV MEL D AFP + V A + +A G+N +MVG PR GMER D++ N I+ Q AL + AA + + +VV NP NTN +I + +P + + + RLD NRA ++ K QV DV NV+IWGNHS++Q PD A + G KPV E++ Sbjct: 3 DPIRVAVTGAAGQIAYSLLVRLASGQLFGKDRKVELKLLEIPQAMGPLEGVMMELQDCAFPTLAKVEAFDNPEQAFDGINWCLMVGSRPRGPGMERSDLIKINGPIFVNQGKALNR-AAQDVRAVVVGNPCNTNCMIAAHNS-DVPHERFSAMMRLDQNRAKYLLASKAGAQVIDVTNVVIWGNHSNNQVPDFEFAKI----GGKPVPEVI 207
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP1_SORBI (Malate dehydrogenase [NADP] 1, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39 Identity = 93/212 (43.87%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+ V + V+GAAG I L+ +A G + G DQP+ L +L + +AL GV MEL D+ +PL++ V D E V+ A+++G PR GMER ++ N I+ Q AL A+ N KVLVV NP NTNALI + AP IPAKN LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ +PV+E++ Sbjct: 84 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEVI 291
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_PEA (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.414e-39 Identity = 90/212 (42.45%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+ + + V+GAAG I L+ +A G + G DQP+ L +L + +AL GV MEL D+ FPL++ VV + D E A+++G PR G+ER ++ N I+ Q AL A+ N KV+VV NP NTNALI + AP+IPAKN LTRLD NRA Q++ K V V N+ IWGNHS++Q PD +A ++ PV+E++ Sbjct: 96 KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVASRNAKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVI 303
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLPN (Malate dehydrogenase OS=Chlamydia pneumoniae GN=mdh PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.458e-39 Identity = 84/212 (39.62%), Postives = 121/212 (57.08%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 KE VRV VTG GQI Y + +A G + G D+ V L + D+P AL+GV+MEL D A+PL+ + TT +A G++ A ++G PR GMER D++ +N I+ Q +AL A + K+ VV NP NTN I + AP + KN + RLD NR ++ + V + +V V+IWGNHS+ Q PD A ++ KP E++ Sbjct: 4 KEVVRVAVTGGKGQIAYNFLFALAHGDVFGVDRGVDLRIYDVPGTERALSGVRMELDDGAYPLLHRLRVTTSLNDAFDGIDAAFLIGAVPRGPGMERGDLLKQNGQIFSLQGAALNTAAKRDAKIFVVGNPVNTNCWIAMKHAPRLHRKNFHAMLRLDQNRMHSMLAHRAEVPLEEVSRVVIWGNHSAKQVPDFTQARIS----GKPAAEVI 211
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_FLABI (Malate dehydrogenase [NADP], chloroplastic OS=Flaveria bidentis PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39 Identity = 90/210 (42.86%), Postives = 123/210 (58.57%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRE 713 K+ + V V+GAAG I L+ +A G + G DQP+ L +L + AL GV MEL D+ +PL++ V D E A+++G PR GMER D++ N I+ Q AL A+PN KV+VV NP NTNALI + AP+IP KN LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ + +R+ Sbjct: 108 KKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLLGSERSFAALEGVAMELEDSLYPLLRQVSIGIDPYEIFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALICLKNAPNIPPKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGIPVTEVIRD 317
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_MEDSA (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa GN=MDH1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.605e-39 Identity = 90/212 (42.45%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+ + + V+GAAG I L+ +A G + G +QP+ L +L + +AL GV MEL D+ FPL++ VV + D E A+++G PR GMER ++ N I+ Q AL A+ N KV+VV NP NTNALI + AP+IPAKN LTRLD NRA Q++ K V V N+ IWGNHS++Q PD +A ++ PV+E++ Sbjct: 92 KKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAALLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVI 299
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP2_SORBI (Malate dehydrogenase [NADP] 2, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.605e-39 Identity = 92/212 (43.40%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+ V + V+GAAG I L+ +A G + G DQP+ L +L + +AL GV+MEL D+ +PL++ V E V+ A+++G PR GMER ++ N I+ Q AL A+ N KVLVV NP NTNALI + P+IPAKN LTRLD NRA QI+ K V V NV IWGNHS++Q PD +A ++ +PV+E++ Sbjct: 87 KKLVTIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVRMELEDSLYPLLREVSIGIGPYEVFQDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASRNVKVLVVGNPCNTNALICLKNTPNIPAKNFHALTRLDENRAKCQIALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEII 294
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLCV (Malate dehydrogenase OS=Chlamydophila caviae GN=mdh PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.213e-38 Identity = 80/209 (38.28%), Postives = 120/209 (57.42%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V V VTG GQI Y+ + +A G + G+D + L + D+P AL+GV+MEL D A+PL++ + TT +AC G++ A ++G PR GMER D++ +N I+ Q S L A + K+ VV NP NTN I AP + +N + RLD NR ++ + V + +V NV++WGNHS+ Q PD A ++ KP E++ Sbjct: 9 VSVAVTGGTGQIAYSFLFALAHGDVFGSDCSIDLRVYDLPGLERALSGVRMELDDCAYPLLQSLRVTTSLEDACDGIDAAFLIGAAPRGPGMERSDLLKRNGEIFSLQGSVLNVCAKRDAKIFVVGNPVNTNCWIAMNKAPKLNRRNFHSMLRLDQNRMHTMLAHRAEVPLDEVTNVVVWGNHSAKQVPDFTQALIS----GKPAVEVI 213 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |