CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_MAIZE (Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38 Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V V V+GAAG I L+ +A G + G DQP+ L +L + +AL GV MEL D+ +PL++ V D V+ A+++G PR GMER ++ N I+ Q AL A+ N +VLVV NP NTNALI + AP+IPAKN LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ +PV+E++ Sbjct: 90 VNVAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYVVFQDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASRNDEVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEVI 294
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_MESCR (Malate dehydrogenase [NADP], chloroplastic OS=Mesembryanthemum crystallinum GN=MDH1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.098e-37 Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+ + + V+GAAG I L+ +A G + G DQP+ L +L + AL GV MEL D+ +PL++ V D + A+++G PR GMER D++ N I+ Q AL A+ N KV+VV NP NTNALI + AP+IPAKN LTRLD NRA Q++ K V V N+ IWGNHS++Q PD +A ++ Sbjct: 95 KKMITIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSFNALEGVAMELEDSLYPLLRAVSIGIDPYDIFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHGLTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKID 294
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLMU (Malate dehydrogenase OS=Chlamydia muridarum GN=mdh PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M + V V VTG GQI Y + +A G + G D + L + DIP +L+GV+MEL D AFPL++ V TT +A ++ A ++G PR GMER+D++ KN I+ Q L A K+ VV NP NTN I AP + KN + RLD NR ++ + V +S V V++WGNHS+ Q PD A ++ Sbjct: 1 MFSQTVSVAVTGGTGQIAYCFLFALAHGDIFGPDTGIDLRIYDIPGTERSLSGVRMELDDGAFPLLQRVQVTTSLHDAFDDIDAAFLIGSVPRGPGMERRDLLKKNGEIFATQGKVLNTAAKREAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLAHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIH 202
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLFF (Malate dehydrogenase OS=Chlamydophila felis (strain Fe/C-56) GN=mdh PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 77/209 (36.84%), Postives = 118/209 (56.46%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V V VTG GQI Y+ + +A G + G+D + L + D+P L+G++MEL D A+PL++ + TT +A G++ A ++G PR GMER D++ +N I+ Q S L A + K+ VV NP NTN I AP + +N + RLD NR ++ + V + +V NV+IWGNHS+ Q PD + ++ KP E++ Sbjct: 7 VSVAVTGGTGQIAYSFLFALAHGDVFGSDCGIDLRVYDLPGLERVLSGIRMELDDCAYPLLQSLRVTTSLEDAFDGIDAAFLIGAAPRGPGMERSDLLKRNGEIFSLQGSVLNTSAKRDAKIFVVGNPVNTNCWIAMSRAPKLNRRNFHSMLRLDQNRMQAMLAHRAQVPLDEVTNVVIWGNHSAKQVPDFTQSLIS----GKPAVEVI 211
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLAB (Malate dehydrogenase OS=Chlamydophila abortus GN=mdh PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.071e-36 Identity = 78/209 (37.32%), Postives = 118/209 (56.46%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V V VTG GQI Y+ + +A G + G+D + L + D+P L+GV+MEL D A+PL++ + TT +A G++ A ++G PR GMER D++ +N I+ Q S L A + K+ VV NP NTN I AP + +N + RLD NR ++ + V + +V +V+IWGNHS+ Q PD A ++ KP E++ Sbjct: 9 VSVAVTGGTGQIAYSFLFALAHGDVFGSDCGIDLRIYDLPGLERVLSGVRMELDDGAYPLLQSLRVTTSLEDAFDGIDAAFLIGAAPRGPGMERSDLLKRNGEIFSLQGSVLNTSAKRDAKIFVVGNPVNTNCWIAMSQAPRLNRRNFHSMLRLDQNRMHTMLAHRAEVPLDEVSHVVIWGNHSAKQVPDFTQALIS----GKPAVEVI 213
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_STEMA (Malate dehydrogenase (Fragment) OS=Stenotrophomonas maltophilia GN=mdh PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSI 404 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A AL GV MEL D AFPL+ G+V T DA A +IA++VG PR GMERKD++ +N I Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKI 110
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH1B_BRAFL (Putative malate dehydrogenase 1B OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 64/200 (32.00%), Postives = 107/200 (53.50%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 +P+ V V AA Y ++P + G +L ++ + LH+ D E L G++ME+ D +FP +K + TTD A +IA+++ F + + M VS YK A A+ Q A+ + +VLV P N+ IL + PSIP +NI + ++ +A ++++L V + V +VI+WGN + Y DV+ A V+ Sbjct: 130 KPLHVCVINAARSPAYHVLPSLVNGKIL-REEEIALHLHDSEENLEKLKGLEMEVFDLSFPFLKEISVTTDLPTAFQNAHIAIVLDDFDQGGKEDAIGDMETKVSFYKRVAEAINQTASKDIRVLVAGTGPLNSLVSILIDHTPSIPRQNIAAVAQVKERQAKSLLAKRLTVNSAGVCDVIVWGNVGGTTYTDVSRARVH 328
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH1B_BOVIN (Putative malate dehydrogenase 1B OS=Bos taurus GN=MDH1B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 54/198 (27.27%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP-ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 P++V +T A+ Y L+P++ G + G + +++ D E L K E D A P ++ V T A EA G ++ +++ KE +D + + + S +E++A K++V N +L ++AP+ A NI + +A ++ KL + S +K+VIIWGN S + Y D+ A V Sbjct: 131 PLQVWITSASSLACYHLIPILTSGEVFGPQMEISINLFDNKHTEEKLISHKQEAEDLASPCLQSVSICTQAEEAFHGAHVIIILDDHVDKEINSLEDCIRSRAPLCQLYGSLIEKNAHNFAKIIVGGKTFVNLKTALLMKYAPTF-AHNIIAVALGVEGQAKAALARKLKITPSCIKDVIIWGNISGNNYVDLRKAKV 327
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH1B_HUMAN (Putative malate dehydrogenase 1B OS=Homo sapiens GN=MDH1B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP-ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 P++V +T A+ Y L+P++ G + G + + + D A E L + +E D A P+++ V T EA ++ V++ KE +D + V + + +E++A + +V+V N ++L +AP I A NI + A ++ KL S +K+VIIWGN S + Y D+ V Sbjct: 131 PLQVWITSASAPACYNLIPILTSGEVFGMHTEISITLFDNKQAEEHLKSLVVETQDLASPVLRSVSICTKVEEAFRQAHVIVVLDDSTNKEVFTLEDCLRSRVPLCRLYGYLIEKNAHESVRVIVGGRTFVNLKTVLLMRYAPRI-AHNIIAVALGVEGEAKAILARKLKTAPSYIKDVIIWGNISGNNYVDLRKTRV 327
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH2_AQUAE (Malate dehydrogenase 2 OS=Aquifex aeolicus GN=mdh2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 57/217 (26.27%), Postives = 104/217 (47.93%), Query Frame = 3 Query: 69 SELMAKEPVRVLVTGAAGQ-IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL 716 S LM K + V+ G G+ + Y L + V L L P A+AL+ +M ++ +KG+ + E G +I V+ G PR+EGM R+D++ +N+ I K A++++A + ++VV+NP +T + P + I LD R + EK+ + +D++ +++ G H P +H+ + G+KP+ E+ Sbjct: 8 SFLMKKPKISVIGAGKVGENVAYLLTILGLGDVYLFARYKKGLE----PAKAKALDLKQMAVLMDIDINVKGISYDKEGFEELKGSDIVVITAGIPRREGMSREDLLYENLKILKKFTDAIKEYAKDSI-IIVVSNPVDTLTYATIKLTGFEPRRVIGMAGVLDSARFKNFVKEKIGISNADIRTLVL-GTHGDLMVPVTSHSFI----GDKPIEEV 214 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |