CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CAUCN (Malate dehydrogenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=mdh PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 56/201 (27.86%), Postives = 88/201 (43.78%), Query Frame = 3 Query: 117 AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 AG IG L + AR + ++ + + P +AL+ + V +KG D G ++ ++ G PRK GM R D++ N+ + KA ++ HA PN V+ + NP + L++F+ K I LD R ++E V V D+ + G H P V H+TV G P+ ELV Sbjct: 11 AGMIGGTLAHIAAREEL---GDVILFDIAEGTPQGKALDIAEASAVFGKDVALKGANDYADIA----GADVCIVTAGVPRKPGMSRDDLLGINLKVMKAVGEGIKAHA-PNAFVICITNPLDAMVWALQQFSGLPKEKVIGMAGVLDSARFAYFLAEATGVSVEDI-HAWTLGGHGDDMVPMVRHSTV----GGLPLPELV 198
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOPS (Malate dehydrogenase OS=Rhodopseudomonas palustris (strain BisB5) GN=mdh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 53/202 (26.24%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ +GQIG L MI + V+ + + P +AL+ + VD G ++ EA G ++ ++ G PRK GM R D++S N+ + + + ++++A P+ V+ + NP + L++ A +PAK + + LD R ++++ NV V DV + G H + P V ++TV Sbjct: 1 MARDKIALI---GSGQIGGTLAHMIG---LKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDAKFTGA----NSYEAIEGASVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYA-PDAFVICITNPLDAMVWALQK-ASGMPAKKVVGMAGVLDSARFRYFLADEFNVSVEDV-TAFVLGGHGDTMVPLVKYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_NITWN (Malate dehydrogenase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=mdh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 52/202 (25.74%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ +GQIG L +I + V+ + D P ++L+ + V+ + G T++ EA G + ++ G PRK GM R D++ N+ + + + + ++A P+ V+ + NP + L++ A +PAK + + LD +R ++++ NV V DV + G H S P V ++TV Sbjct: 1 MARDKIGLI---GSGQIGGTLAHLIG---LKELGDVVMFDIADGVPQGKSLDIAQSSPVEGFDARLAG----TNSYEALEGAGVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIRKYA-PDAFVICITNPLDAMVWALQK-ASGLPAKKVVGMAGVLDSSRFRYFLADEFNVSVEDV-TAFVLGGHGDSMVPLVKYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_VIBMA (Malate dehydrogenase OS=Vibrio marinus GN=mdh PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 644 ++V V GAAG IG AL ++ + G+D L + DI P GV ++L + A D +A G ++ ++ G RK GM+R D+ + N I K A + PN + ++ NP NT I E A + + +T LD R+ +SE + ++DV+ +I G HS Sbjct: 1 MKVAVLGAAGGIGQALALLLKTQLPAGSD----LSLYDIAPVTP---GVAVDLSHIPTDVTIAGFAGMDPTDALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLAGKCAE-VCPNACIGIITNPVNTTVPIAAEVLKQAGVYDKRKLFGITTLDVIRSETFVSELKGISLADVEVPVI-GGHS 178
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOP2 (Malate dehydrogenase OS=Rhodopseudomonas palustris (strain HaA2) GN=mdh PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 53/202 (26.24%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ +GQIG L MI + V+ + + P +AL+ + VD G ++ EA G ++ ++ G PRK GM R D++S N+ + + + ++++A P+ V+ + NP + L++ A +PAK + + LD R ++++ NV V DV + G H + P V ++TV Sbjct: 1 MARDKIALI---GSGQIGGTLAHMIG---LKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDANFTGA----NSYEAIEGASVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYA-PDAFVICITNPLDAMVWALQK-ASGMPAKKVVGMAGVLDSARFRYFLADEFNVSVEDV-TAFVLGGHGDTMVPLVKYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOPT (Malate dehydrogenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 51/202 (25.25%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ +GQIG L ++ + V+ + + P +AL+ + VD + G ++ EA G + ++ G PRK GM R D++S N+ + + + ++++A P+ V+ + NP + L++ A +PAK + + LD R ++++ NV V DV + G H + P V ++TV Sbjct: 1 MARDKIALI---GSGQIGGTLAHLVG---LKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDSKLTGA----NSYEAIEGARVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYA-PDAFVICITNPLDAMVWALQK-ASGLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDV-TAFVLGGHGDTMVPLVKYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOPA (Malate dehydrogenase OS=Rhodopseudomonas palustris GN=mdh PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 51/202 (25.25%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ +GQIG L ++ + V+ + + P +AL+ + VD + G ++ EA G + ++ G PRK GM R D++S N+ + + + ++++A P+ V+ + NP + L++ A +PAK + + LD R ++++ NV V DV + G H + P V ++TV Sbjct: 1 MARDKIALI---GSGQIGGTLAHLVG---LKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDSKLTGA----NSYEAIEGARVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYA-PDAFVICITNPLDAMVWALQK-ASGLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDV-TAFVLGGHGDTMVPLVKYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_METSB (Malate dehydrogenase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=mdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 52/201 (25.87%), Postives = 92/201 (45.77%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA+ + ++ AGQIG L + A + V+ + + P +AL+ + V+ +KG + D G ++ ++ G PRK GM R D++ N+ + A ++Q+A P+ V+ + NP + L++ + PAK + LD R +SE+ V V DV + G H P + ++TV Sbjct: 1 MARSKIALI---GAGQIGGTLAHLAA---LKELGDIVLFDIAEGTPQGKALDLAESGPVEGFNASLKGANSYADIA----GADVIIVTAGVPRKPGMSRDDLLGINLKVMDAVGGGIKQYA-PDAFVICITNPLDAMVWALQKSSGLAPAKIVGMAGVLDSARFRYFLSEEFKVSVEDV-TAFVLGGHGDDMVPSLRYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_METNO (Malate dehydrogenase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=mdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 52/201 (25.87%), Postives = 90/201 (44.78%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 MA++ + ++ AGQIG L + + V+ + D P + L+ + VD G A G ++ ++ G PRK GM R D++ N+ + +A + ++ HA PN V+ + NP + L++F+ P K + LD R ++E+ +V V DV + G H P V ++TV Sbjct: 1 MARKKIALI---GAGQIGGTLAHLAG---LKELGDVVLFDIADGVPQGKGLDIAESAPVDGFDAKYSGA----SDYSAIAGADVVIVTAGVPRKPGMSRDDLIGINLKVMEAVGTGIKTHA-PNAFVICITNPLDAMVWALQKFSGLDPKKIVGMAGVLDSARFRHFLAEEFSVSVEDV-TAFVLGGHGDDMVPLVRYSTV 189
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOSK (Malate dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=mdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 50/189 (26.46%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 117 AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 AGQIG L + A + V+ + + P +AL+ + + ++KG ++ E G ++ ++ G PRK GM R D++ N+ + K+ ++ HA PN V+ + NP + L++F+ +PA+ + + LD R +S + NV + DV + G H + P V ++TV Sbjct: 11 AGQIGGTLAHLAA---IKELGDVVLFDIAEGTPQGKALDIAQSGPSEGFDAVMKGA----NSYEEIAGADVCIVTAGVPRKPGMSRDDLIGINLKVMKSVGEGIKAHA-PNAFVICITNPLDAMVWALQQFS-GLPAEKVVGMAGVLDSARFRHFLSVEFNVSMRDV-TAFVLGGHGDTMVPLVRYSTV 189 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |