CF835922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.759e-83 Identity = 144/199 (72.36%), Postives = 167/199 (83.92%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAPV S +A HE SV+EIT S FEP + M KCDPR GKYMA CL+YRGDVV +DV AVA +K+K+T+Q VDWCPTGFK GI YQPPT + G +LA RAVCM+SN+T++AE + RID KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 235 VVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVFSKSRATHEANSVSEITQSCFEPGNQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 4.909e-83 Identity = 142/199 (71.36%), Postives = 169/199 (84.92%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S ++A HE SV+EITN+ FEP + M KCDP GKYMA CL+YRGDVV +DV AV +K K+T+Q VDWCPTGFK GI Y+PP+V+P +LA V RAVCM+SN+T++A+ + RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 235 VISSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 2.063e-81 Identity = 135/199 (67.84%), Postives = 170/199 (85.43%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 ++SS TASLRF G++NVD+ EFQTNLVP+PRIHF L +YAP++SAE++ HEQ ++ +TN+ FE S+MM KCDPR GK+MACC++YRGDVVPKDVNAAV+ IK+KR IQFVDWCPTGFK GINY+ P VP GDLAK RA CM+SN+T+++ FS + +KFDLM+ KRAFVHWYVGEGMEEGEF+EARE++A LE+D+ Sbjct: 245 IVSSTTASLRFSGSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDF 443
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.694e-81 Identity = 141/182 (77.47%), Postives = 161/182 (88.46%), Query Frame = -3 Query: 282 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 827 V+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SV+EITN+ FEP++ M KCDPR+GKYMA CL+YRGDVV KDVNAAVA ++TKRTIQFVDWCPTGFK G+ YQPP VP GDLAKV RAVCM+SN+TS+AE + R+DHKFDLMY+KRAFVHWYVGEGMEE Sbjct: 31 VVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVISAAKAVHEANSVSEITNACFEPNNQMVKCDPRNGKYMATCLLYRGDVVTKDVNAAVAAVRTKRTIQFVDWCPTGFKLGVCYQPPQHVPHGDLAKVDRAVCMLSNTTSIAEAWPRLDHKFDLMYSKRAFVHWYVGEGMEE 212
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.521e-79 Identity = 136/199 (68.34%), Postives = 168/199 (84.42%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+SS+TASLRF G+LNVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITN+ FEP + M +CD R GKYMACCL++RGDV PK+ N A A +K KRT QFV+WCPTGFK GIN + PTV+ G +A+V RAVC +SN+T+++E + R+++KFDLM++KRAFVHWYVGEGMEEGEFSEAREDLA LE DY Sbjct: 230 VVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDLAMLEDDY 428
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 288.5 bits (737), Expect = 3.082e-77 Identity = 136/204 (66.67%), Postives = 165/204 (80.88%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVP-----GGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+SS+T+SLRFDGALNVD+ EFQTNLVP+PR+H+ L SYAPVISA K+ HE +E+T FEP++ M CDPR+GKYMA L+YRGDVVP+D +AAVA +K K + V+WCPTGFK GIN+Q P VP G LA V R+V M+SN+T++AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLA+LEKDY Sbjct: 235 VVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLASLEKDY 438
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 288.115 bits (736), Expect = 4.025e-77 Identity = 132/199 (66.33%), Postives = 163/199 (81.91%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+SS+T+SLRFDGALNVD+ EFQTNLVP+PRIH+ L SYAPVIS+ ++ HE V ++T EP++ M CDPR+GKYMA L+YRGD VP+D A+A++K K + V+WCPTGFK GINYQ P VPG +LA V R+V M+SN+T+++E +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 236 VVSSITSSLRFDGALNVDLNEFQTNLVPFPRIHYPLISYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 434
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.691e-75 Identity = 129/201 (64.18%), Postives = 165/201 (82.09%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK--RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLT+SLRF G LN+D+ + QTNLVP+PR+HF+L SYAPVIS EKA+HE ++V IT++ F ++MAKC P GKYMACCLMYRGD+VPK+ AV I+++ R + FVDW PTGFKCGIN Q P ++A+V+++VCM+SN+T++++VFSRI+HKFDLM+ KRAFVHWYVGEGMEEGEF+EAR+DL ALEKDY Sbjct: 241 VISSLTSSLRFPGQLNLDINDIQTNLVPFPRLHFVLCSYAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAFVHWYVGEGMEEGEFAEARDDLLALEKDY 441
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_LYTPI (Tubulin alpha chain (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.700e-73 Identity = 124/142 (87.32%), Postives = 137/142 (96.48%), Query Frame = -3 Query: 231 ITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 656 ITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 1 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 142
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.651e-72 Identity = 126/198 (63.64%), Postives = 163/198 (82.32%), Query Frame = -3 Query: 231 ISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 824 +S++T SLRF G+LNVD+ E+QTNLVPYPRIHFMLSS AP+IS ++ Y+ + +VAE+T+S FE +MMAKC+PR GKY+A CLMYRGDVV K+V AV +K+K IQFVDW P FK G+N Q PTV+P + A+V+R+ MISN+T++++VF R++ KFDL+YAKRA+VH +V EGMEEGEF+EAREDLAALEKDY Sbjct: 233 VSAITCSLRFSGSLNVDMNEYQTNLVPYPRIHFMLSSLAPMISRQENYYHENNVAELTSSVFEADNMMAKCNPRDGKYIASCLMYRGDVVNKEVTDAVKNVKSKANIQFVDWSPCAFKIGVNSQKPTVLPDSEFAQVERSCAMISNNTAISQVFERMNDKFDLLYAKRAYVHHFVSEGMEEGEFAEAREDLAALEKDY 430 The following BLAST results are available for this feature:
BLAST of CF835922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835922 ID=CF835922; Name=CF835922; organism=Citrus sinensis; type=EST; length=829bpback to top |