CF835922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.812e-35 Identity = 70/199 (35.18%), Postives = 115/199 (57.79%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.812e-35 Identity = 70/199 (35.18%), Postives = 118/199 (59.30%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ + + ++V E+T+ F+ +MMA DPRHG+Y+ +RG V K+V + ++++K + FV+W P + + P G ++ +V I NST++ ++F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTARGSQQYRAVTVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIPN----NVQTAHCDIAPRG----LKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVAEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.812e-35 Identity = 70/199 (35.18%), Postives = 113/199 (56.78%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF ++ +AP+ + + ++V E+T F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP V+ AV + NST++ E+F R+ F M+ ++AF+HWY EGM+E EF+EA ++ L +Y Sbjct: 232 VMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLSAQCDIPP--------RGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLIAEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.812e-35 Identity = 70/199 (35.18%), Postives = 115/199 (57.79%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S LT RF G LN D+ + NLVP+PR+HF +AP+ +A A ++ L VAE+T F+P ++M+ D R+G+++ C +YRG V K + + ++ K + FV+W P + PP + + I NST++ ++F R+ +F +M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 235 VMSGLTTGFRFPGQLNADLRKLAVNLVPFPRLHFFTVGFAPLTTA--AAYQNLGVAELTQQMFDPKNVMSASDFRNGRFLTCSAIYRGKVSTKQIEEQIRGVQAKNSAYFVEWIPNNVQTAHCSIPPV--------GMNASSTFIGNSTAIQDIFRRVGDQFSVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 423
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.978e-35 Identity = 72/201 (35.82%), Postives = 116/201 (57.71%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDV-TEFQTNLVPYPRIHFMLSSYAPVIS-AEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ NLVP+PR+HF + +AP+ S + Y + LSVA++T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + F++W P K I PP ++ +V I N+T + E+F R+ +F M+ ++ F+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTCCLRFPGQLNSDLRNRLAVNLVPFPRLHFFMMGFAPLTSRGSQEYRQGLSVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPP--------KGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNMNDLVSEY 424
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_ERYGR (Tubulin beta chain OS=Erysiphe graminis subsp. hordei GN=TUB2 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.978e-35 Identity = 70/199 (35.18%), Postives = 114/199 (57.29%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQQKNVSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_COCHE (Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.978e-35 Identity = 70/199 (35.18%), Postives = 114/199 (57.29%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C +RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.502e-35 Identity = 69/199 (34.67%), Postives = 115/199 (57.79%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVHEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB_BOTFU (Tubulin beta chain OS=Botryotinia fuckeliana GN=tubA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.502e-35 Identity = 69/199 (34.67%), Postives = 115/199 (57.79%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.502e-35 Identity = 69/199 (34.67%), Postives = 115/199 (57.79%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 232 VMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVHEY 422 The following BLAST results are available for this feature:
BLAST of CF835922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835922 ID=CF835922; Name=CF835922; organism=Citrus sinensis; type=EST; length=829bpback to top |