CF835922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 2.858e-107 Identity = 183/199 (91.96%), Postives = 192/199 (96.48%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT VPGGDLA+VQRAVCM++N+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL ALEKDY Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTAVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLVALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 3.733e-107 Identity = 184/199 (92.46%), Postives = 195/199 (97.99%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAPVISAEKA+HEQLSVAE+TN+ F+PSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRTIQFVDWCPTGFKCGINYQPP+VVPGGDLAKVQRA+CMISN+T++AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE EFSEAREDLAALEKDY Sbjct: 234 VISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFDPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAVIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEVEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_TETPY (Tubulin alpha chain OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 387.497 bits (994), Expect = 4.875e-107 Identity = 185/199 (92.96%), Postives = 195/199 (97.99%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSVAEITNSAFEP++MMAKCDPRHGKYMAC +MYRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQP TVVPGGDLAKV RAVCMISNST++AEVFSR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPSTVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 8.316e-107 Identity = 183/199 (91.96%), Postives = 196/199 (98.49%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+SSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+L+SYAPVISAEKAYHEQLSV+EI+N+ FEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMI+NST++AEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VVSSLTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.853e-106 Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 +ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVD CPTGFKCGINYQPP+VVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA LEK Y Sbjct: 234 IISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAXLEKXY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2) HSP 1 Score: 385.185 bits (988), Expect = 2.420e-106 Identity = 183/199 (91.96%), Postives = 193/199 (96.98%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLT SLRFDGALNVD+ EFQTNLVPYPRIHFML+SYAPVISAEKA+HEQLSVAE+TN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV AAVA IKTKRTIQFVDWCPTGFKCGINYQ P+VVPGGDLAKVQRA+CMISN+T++AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VISSLTTSLRFDGALNVDINEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVTAAVAVIKTKRTIQFVDWCPTGFKCGINYQAPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 4.127e-106 Identity = 181/199 (90.95%), Postives = 196/199 (98.49%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 V+S+LTASLRFDGALNVD+TEFQTNLVPYPRIHF+L++YAPVISAEKAYHEQLSV+EI+N+ FEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMI+NST++AEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VVSALTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTTYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 5.390e-106 Identity = 187/199 (93.97%), Postives = 192/199 (96.48%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+ KA+HEQLSVAEIT+SAFEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ PTVVPG DLAKVQRAVCMISNSTSV EVFSRI+ KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRINSKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 7.040e-106 Identity = 187/199 (93.97%), Postives = 194/199 (97.49%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSY PVISAEKAYHEQLSVAEITNS+FEP+SMMAKCDPRHGKYMACC+M+RGDVVPKDVNAAVATIKTKRTIQFVDW P GFK GINYQPPTVVPGGDLAKV RAVCMISNST++AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYGPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMFRGDVVPKDVNAAVATIKTKRTIQFVDWSP-GFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 431
BLAST of CF835922 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 1.201e-105 Identity = 183/199 (91.96%), Postives = 191/199 (95.98%), Query Frame = -3 Query: 231 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 827 VISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAP+IS EKAYHEQ SV EITNS FE SS+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN+T+VAEVFSRID KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 234 VISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAYHEQHSVPEITNSVFESSSVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432 The following BLAST results are available for this feature:
BLAST of CF835922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835922 ID=CF835922; Name=CF835922; organism=Citrus sinensis; type=EST; length=829bpback to top |