CF835923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.239e-54 Identity = 97/248 (39.11%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD +RK A+ C LQGF + +++ +Y + ++V+PSP+VS +VVEPYN+ LS H L+E+ D +++DNEA+YDIC R+L + PTY +LN LVS IS +T LRF G LN D+ + NL+P+PR+HF + + P+ S + L+V E+T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_MYCPJ (Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.207e-53 Identity = 100/248 (40.32%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C +YRG V K+V + ++ K T FV+W P Sbjct: 99 NNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNMMAASDFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 98/248 (39.52%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD +RK A+ C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+ D +++DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 100/248 (40.32%), Postives = 152/248 (61.29%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+EH+D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + +++K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDNVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQSKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB3_CHICK (Tubulin beta-3 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 99/248 (39.92%), Postives = 152/248 (61.29%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +RK A++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V ++T F+ +MMA C+P HG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFDAKNMMAACEPGHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 99/248 (39.92%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ CC ++RG V K+V + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGSGMGTLLLSKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPAYGDLNYLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 100/248 (40.32%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD IR+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ CC ++RG V K+V + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDNVLDVIRREAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPAYGDLNYLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53 Identity = 98/248 (39.52%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD +RK A+ C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+ D +++DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.058e-53 Identity = 99/248 (39.92%), Postives = 154/248 (62.10%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +RK A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L ++ PTY +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ + + ++V E+T+ F+ +MMA DPRHG+Y+ +RG V K+V + ++++K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLQTPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTARGSQQYRAVTVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 2.058e-53 Identity = 97/248 (39.11%), Postives = 152/248 (61.29%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+++ +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +MMA CDPRHG+Y+ ++RG + ++V+ + I+ K + F DW P Sbjct: 99 NNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLP 346 The following BLAST results are available for this feature:
BLAST of CF835923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835923 ID=CF835923; Name=CF835923; organism=Citrus sinensis; type=EST; length=759bpback to top |