CF835923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.585e-53 Identity = 100/248 (40.32%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD +D +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+EH+D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P Sbjct: 99 NNWAKGHYTEGAELVDNVVDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAYSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_TRYBR (Tubulin beta chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.989e-53 Identity = 97/248 (39.11%), Postives = 152/248 (61.29%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD K A++C LQGF + +++ Y + + F++ PSP+VS +VVEPYN+ LS H L+E++D ++ +DNEA+YDIC R+L + PT+ +LN LVS V+S +T LRF G LN D+ + NLVP+PR+HF + +AP+ S + LSV E+T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + F++W P Sbjct: 99 NNWAKGHYTEGAELIDSVLDVCCKEAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREQYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.989e-53 Identity = 99/248 (39.92%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD +D +R+ A+ C LQGF + +++ ++ + ++V PSP+VS +VVEPYN+ LS H L+EH+D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P Sbjct: 99 NNWAKGHYTEGAELVDQVVDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATYSVVPSPKVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.822e-53 Identity = 97/249 (38.96%), Postives = 154/249 (61.85%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 751 NN+++GHYT G E++D +D +RK A++ LQGF + +++ D+ + F+V PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC R+L + P Y +LN LVS V+S +T LRF G LN D+ + N++P+PR+HF ++ +AP+I+ + SV+E+T F+ +MM CDPR G+Y+ M+RG + KDV+ ++ +++K + FV+W P+ Sbjct: 99 NNWAKGHYTEGAELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDICFRTLKLNNPGYGDLNHLVSLVMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFVAGFAPLIAIGTQKFKTYSVSELTQQMFDSKNMMTACDPRKGRYLTVAAMFRGKISMKDVDEQMSMVQSKNSSLFVEWIPS 347
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.822e-53 Identity = 96/248 (38.71%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+++ +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LV +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +MMA CDPRHG+Y+ ++RG + ++V+ + I+ K + F DW P Sbjct: 99 NNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVCATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52 Identity = 98/248 (39.52%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 N +++GHYT G E+VD +D IR+ A+ C LQGF + +++ ++ + F+V PSP+ S +VVEPYN+ LS H L+EH+D +DNEA+YDIC+R+L + +P+Y +LN LVS V+S +T SLR+ G LN D+ + NLVP+PR+HF + YAP+ + L+V E+T F+ +MMA DPR+G+Y+ +RG V K+V + +++K + FV+W P Sbjct: 99 NVWAKGHYTEGAELVDSVMDVIRREAEGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKTSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLTAIGSQSFRSLTVPELTQQMFDAKNMMAAADPRNGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52 Identity = 99/249 (39.76%), Postives = 152/249 (61.04%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 751 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W PT Sbjct: 99 NNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLTNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPT 347
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_PHYCI (Tubulin beta chain OS=Phytophthora cinnamomi PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52 Identity = 98/248 (39.52%), Postives = 149/248 (60.08%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD +RK A++C LQGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+ D + LDNEA+YDIC R+L + PTY +LN LV +S +T LRF G LN + F NL+P+PR+HF + +AP+ S + L+V E+T F+ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTCLRFPGQLNSVLKLFAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_GIBZE (Tubulin beta chain OS=Gibberella zeae GN=TUB2 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52 Identity = 99/248 (39.92%), Postives = 152/248 (61.29%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + +++K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGRVAMKEVEDQMRNVQSKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_EPITY (Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52 Identity = 99/248 (39.92%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P Sbjct: 99 NNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIP 346 The following BLAST results are available for this feature:
BLAST of CF835923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835923 ID=CF835923; Name=CF835923; organism=Citrus sinensis; type=EST; length=759bpback to top |