CF835923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 3.286e-51 Identity = 95/248 (38.31%), Postives = 151/248 (60.89%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++G YT G E++D +D IR+ A+ LQGF + +++ +Y + ++V PSP+VS +V EPYN+VLS H L+++ D LDNEA+YDIC ++L I RP++ +LN L++ V+S +T LR+ G LN D+ + NLVP+PR+HF + +AP+ + L+V E+T F P+++MA C+P HG+Y+ ++RG V K+V A+ T +TK + FV+W P Sbjct: 101 NNWAKGFYTEGAELMDSVMDIIRREAEQSESLQGFQLAHSLGGGTGSGLGTLLLTKIREEYPDRMLSTYSVLPSPKVSDTVTEPYNAVLSFHQLIDNADATYCLDNEALYDICEKTLKINRPSHQDLNSLIALVMSGVTTGLRYPGQLNGDLRKLAVNLVPFPRLHFFTTGFAPLFAKNSRAFHNLTVPELTQQLFNPANVMAACNPYHGRYLTISTIFRGQVAMKEVEDAIHTARTKYSPYFVEWIP 348
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB4Q_HUMAN (Putative tubulin beta-4q chain OS=Homo sapiens GN=TUBB4Q PE=5 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.292e-51 Identity = 96/248 (38.71%), Postives = 149/248 (60.08%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++G YT G E+++ +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +MMA DPRHG Y+ ++RG + ++V+ + I+ K + F DW P Sbjct: 99 NNWAKGRYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATVSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSQGSQQYRALTVAELTQQMFDAKNMMAARDPRHGCYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.605e-51 Identity = 95/248 (38.31%), Postives = 150/248 (60.48%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++G YT G E++D L +RK A+NC LQGF V +++ +Y + + F+V+ SP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDI R+L + PT+ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P Sbjct: 99 NNWAKGXYTEGAELIDSVLAVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFASPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIXLRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYXSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.782e-50 Identity = 93/249 (37.35%), Postives = 151/249 (60.64%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 751 NN+++GHYT G E++D +D +RK A++ LQGF + +++ D+ + F+V PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YD+C R+L + P Y +LN LVS V+S +T LRF G LN + + N++P+PR+HF + +AP+ + + SV+E+T F+ +MM CDP+ G+Y+ M+RG + KDV+ ++ +++K + FV+W P+ Sbjct: 99 NNWAKGHYTEGAELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDMCFRTLKLNNPGYGDLNHLVSLVMSGVTTCLRFPGQLNAYLRKLAVNMIPFPRLHFFVVGFAPLTAVGTQKFKTYSVSELTQQMFDSKNMMTACDPKKGRYLTVAAMFRGKISMKDVDEQMSMVQSKNSSLFVEWIPS 347
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.633e-50 Identity = 96/248 (38.71%), Postives = 149/248 (60.08%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G E++D LD +RK A++C LQGF + +++ +Y + + F+V PSP+VS +VVEPYN+ LS H L+E+ D + + NEA+YDIC +L + PT+ + LVS V+S +T LRF G LN D+ + NL+P+PR+HF L +AP+ S + L+V E+T F+ +MMA DP HG+Y+ M+RG + K+V+ + ++ K + FV+W P Sbjct: 97 NNWAKGHYTEGPELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDICLPTLKLTTPTFGH-ETLVSAVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPAHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP 343
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.057e-49 Identity = 93/248 (37.50%), Postives = 148/248 (59.68%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++G YT G E+ + +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +M A DPRHG+Y+ +++G + ++V+ + I+ K + F DW P Sbjct: 27 NNWAKGRYTEGAELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMVTLLISKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMRAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFP 274
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.526e-48 Identity = 91/248 (36.69%), Postives = 149/248 (60.08%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 N +++GHYT G E+ D LD +R+ A+ C LQGF + +++ +Y + F+V P+P+ S +VVEPYN+ LS H L+E++D +DNEA+ I +L I+ P+Y +LN LVS V++ +T S RF G LN D+ + N+VP+PR+HF + +AP+ + + + +SV E+T F+ ++MM DPRHG+Y+ ++RG V K+V+ + +++TK + FV+W P Sbjct: 99 NIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.441e-48 Identity = 90/248 (36.29%), Postives = 146/248 (58.87%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++GHYT G ++++ LD +RK A+ C LQGF + +++ +Y + ++V PSP VS +VVEPYN+ LS + L+E++ + +DNEA+Y IC R+L + PTY LN LVS +S +T LRF G LN D+ + N++P+PR+HF + +AP+ S + L+V E+T F+ +MMA CDP G+Y+ ++RG + K+++ + ++ K FV+W P Sbjct: 99 NNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHSLGGGTGSGMGTLLLANLTDEYPDRITATYSVVPSPTVSETVVEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMAPTYGALNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIP 346
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.441e-48 Identity = 93/249 (37.35%), Postives = 147/249 (59.04%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFT-VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 N +++GHYT G E+VD +D +R+ A+ C LQGF + +++ ++ + F+ V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MM D R+G+Y+ ++RG V K+V + ++ K FV+W P Sbjct: 99 NTWAKGHYTEGSELVDQVIDVVRREAERCDCLQGFQIIHSLGGGTGAGMGTLLISKIREEFPDRMMATFSSVVPSPKVSDTVVEPYNATLSNHQLVENSDETFCIDNEALYDICMRTLKLSEPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAYSFRVVTVPELTQKMYDPKNMMCLLDFRNGRYLTASAIFRGKVSMKEVEDQMRNVQNKNHTYFVEWIP 347
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.894e-48 Identity = 89/248 (35.89%), Postives = 153/248 (61.69%), Query Frame = 2 Query: 5 NNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 748 NN+++G+YT G E++D LD +R+ + LQGF + +++ +Y + F++ P+P VS +VVEPYNS+LS H L+++ D+ + +DNEA+YDI R+L I+ P Y +LN+L+++V+ ++ SLRF G LN D+ + NLVP+PR+HF++ S+AP + ++LSV+E+T+S F+ +++ DPR G+Y+ ++RG V + +V ++ K + FV+W P Sbjct: 103 NNWAKGYYTEGAELIDGILDIVRRQCEATEALQGFQMIHSLGGGTGAGLGSLLLSKLREEYPDRMLSTFSILPAPNVSETVVEPYNSLLSIHQLVDNCDLTICIDNEALYDIAVRTLKIKSPGYKDLNQLIAKVMCGVSTSLRFPGQLNGDLRKLGMNLVPFPRLHFLMPSFAPFYDPKARTFQRLSVSELTSSLFDKKNLLVASDPRFGRYLTAACIFRGKVSSHEAENSVMQLQRKNSNLFVEWIP 350 The following BLAST results are available for this feature:
BLAST of CF835923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835923 ID=CF835923; Name=CF835923; organism=Citrus sinensis; type=EST; length=759bpback to top |