CF835933

Overview
NameCF835933
Unique NameCF835933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.229e-76
Identity = 130/173 (75.14%), Postives = 147/173 (84.97%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PGI+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL+LP  APKC H NNHYDG MNFMHRDEEVDYFPSR+DP  HA RYPIPS  + GRREK  IEKENNFKQPGERYRS  P RQERF+NRWI AL DPR+THE+ +IW+SYW QAD+SLGQKLAS L+ +PS+
Sbjct:  320 EQLAFCPGIIVPGVYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCSHHNNHYDGLMNFMHRDEEVDYFPSRFDPAKHAPRYPIPSRTLNGRREKMVIEKENNFKQPGERYRSMDPARQERFINRWIDALSDPRLTHEIKAIWLSYWSQADKSLGQKLASRLSSKPSM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.605e-76
Identity = 130/172 (75.58%), Postives = 148/172 (86.05%), Query Frame = -3
Query:  213 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPS 728
            E LAF P I+VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  APKC H NNHYDGFMNFMHRDEE+DYFPSRYDP  HAE+YPIP   ++G+R+K  IEKENNFKQPGERYRS++PDRQERF+NR +  L DPRVTHEV SIWVSYW QAD+SLGQK+AS LNV+P+
Sbjct:  320 EQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.605e-76
Identity = 129/173 (74.57%), Postives = 149/173 (86.13%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P IVVPG+Y S+DK+LQ RIF+Y D QRHRLGPNYL LPV APKC H NNH++GFMNFMHRDEEV+YFPSR+DP  HAE+YPIP  V+TG+R+K  IEKENNFKQPGERYRSWAPDRQERF+ RW+ AL DPRVTHE+ SIW SYW QAD++LGQK+AS LNVRP++
Sbjct:  320 EQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.576e-76
Identity = 126/173 (72.83%), Postives = 149/173 (86.13%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL+LP  APK  H NNH++GFMNF+HRDEEV+YFPSRYDP  HAE++PIP  V +GRREK  IEKENNFKQ GER+RSWAPDRQ+RF+ RW+ AL DPRVTHE+ S+W+SYW QADRSLGQK+AS LN+RP+I
Sbjct:  320 EQLAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 284.263 bits (726), Expect = 4.670e-76
Identity = 126/173 (72.83%), Postives = 149/173 (86.13%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAFNPG+VVPGIYYS+DK+LQCRIFAYGDTQRHRLGPNYL LPV APKC H NNH++GFMNFMHRDEE++Y+PS++DP   AE+ P P++  TG R K  I+KENNFKQ G+RYRSWAPDRQ+RF+ RW++ L +PR+THE+  IW+SYW QADRSLGQKLAS LNVRPSI
Sbjct:  320 EQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.965e-76
Identity = 126/173 (72.83%), Postives = 150/173 (86.71%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P ++VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  APKC H NNH++G MNFMHRDEEV+YFPSR+DP  HAER+PIP  V+TG+R++  IEKENNFKQPGERYR++APDRQERF+ RW+ AL DPRVTHE+ SIW+SYW QAD+SLGQKLAS LNVRP++
Sbjct:  320 EQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.318e-75
Identity = 126/173 (72.83%), Postives = 148/173 (85.55%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPGI+YS+DK+LQ R+F+Y DTQRHRLGPNYL LPV APKC H NNH++GFMNFMHRDEEV+YFPSRYD   HAE+YP P  V +G+RE+  IEKENNFK+PGERYR++ P+RQERF+ RWI AL DPR+THE+ SIW+SYW QAD+SLGQKLAS LNVRPSI
Sbjct:  320 EQLAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 3.953e-75
Identity = 127/173 (73.41%), Postives = 147/173 (84.97%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PGIVVPG+ YS DK+LQ RIF+Y DTQRHRLGPNYL LPV APKC H NNH++GFMNFMHRDEEV+YFPSR DP  +AE +P+PS + +G+REK  IEKENNFKQPGERYRSWAPDRQERFLNR +  L DPR+THE+ +IW+SYW Q D+SLGQKLA+ LNV+PSI
Sbjct:  320 EQLAFCPGIVVPGVSYSEDKLLQTRIFSYSDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.962e-74
Identity = 122/173 (70.52%), Postives = 150/173 (86.71%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            EMLA +P  +VPGIY+S+DKMLQ R+FAY DT RHRLGPNY++LPV APKC H NN YDG+MNF+HRDEEVDYFPS++D T +AER+P P  ++TG+R+K  IEKENNFKQPG+RYRSWAPDRQ+RF+NRW+KAL +PRVTHE+ S W+SY  QADRSLGQK+AS LN+RP++
Sbjct:  320 EMLAMDPAHIVPGIYFSDDKMLQARVFAYADTHRHRLGPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEVDYFPSKFDNTRNAERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.833e-73
Identity = 123/173 (71.10%), Postives = 145/173 (83.82%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPV APKC H NNH DG MNFMHRDEEVDY PSR+DP   AE+YPIPS V+TGRREK  I KENNFKQ GERYRSWAPDRQ+R++N+W+++L DPR THE+ SIW+SY  QAD+S GQK+AS L V+P++
Sbjct:  320 EQLAFNPGHIVPGVYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERYRSWAPDRQDRYINKWVESLSDPRATHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CATA1_WHEAT1.229e-7675.14Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]
CATA_HELAN1.605e-7675.58Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA3_NICPL1.605e-7674.57Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA_PHAAU3.576e-7672.83Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA3_ARATH4.670e-7672.83Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA_SOLAP7.965e-7672.83Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA2_ARATH2.318e-7572.83Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA1_RICCO3.953e-7573.41Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA_IPOBA1.962e-7470.52Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA_CAPAN2.833e-7371.10Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCTAAAACAGACTTTTATTAATTGACCCTCAGGA
AAAGAGTCACATAACATGCAAGTTTATTTTCTCTATTACAATATACAACA
GCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGGGTTCACT
CCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTG
ACACCTTCAAATGCTTGGCCTCACATTGAGACAAGAAGCTAGCTTCTGAC
CCAAAGATCTGTCGGCCTGAAACCAGTAAGAGACCCATATGCTGCCAACC
TCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAA
CCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCT
TGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATT
ACATCAGAAGGAATGGGATATCTCTCAGCATGACAAGTAGGATCATACCT
CGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAAC
CATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATAAACTGGAAGC
ATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAA
GATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCA
CGATACCAGGGTTAAATGCAAGCATTTCAT
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