CF835933

Overview
NameCF835933
Unique NameCF835933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:359..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.531e-70
Identity = 119/173 (68.79%), Postives = 140/173 (80.92%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPV APKC H NNH DG MN  HRDEEVDY PSR+DP   AE+YPIPS V+ GRR    I KENNFKQ GERYRSW PDRQ+R++N+W+++L DPRVTHE+ SIW+SY  QAD+S GQK+AS L V+P++
Sbjct:  320 EQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.530e-70
Identity = 121/173 (69.94%), Postives = 142/173 (82.08%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P + VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPV APKC H NNH+DG MNF+HRDEEV+YFPSR DPT HAE+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE+ SIWVSYW Q D SLGQKLAS L ++P++
Sbjct:  320 EQLAFCPAVTVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEVNYFPSRVDPTRHAEKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.530e-70
Identity = 120/173 (69.36%), Postives = 143/173 (82.66%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPV APKC + NNH+DG MNFMHRDEEV+YFPSR+D   HAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+  IW+SYW Q D SLGQKLAS LN++P++
Sbjct:  320 EQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.609e-68
Identity = 119/173 (68.79%), Postives = 140/173 (80.92%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E +AF P I VP I+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPV APKC H NNH+DGFMNFMHRDEEV+YFPSR+DP  HAE+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+RF+ RW+ AL  PRVTHE  +IW+SYW Q D +LGQKL S LN++PS+
Sbjct:  320 EQIAFCPAISVPAIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.101e-68
Identity = 117/173 (67.63%), Postives = 139/173 (80.35%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPV APKC H NNH DG MN  HRDEEVDYFPSR+DP   AE+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R++N+W+++L DPRVTHE+ SIW+SY  QAD+S GQK+AS L V+P++
Sbjct:  320 EQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.113e-68
Identity = 116/173 (67.05%), Postives = 138/173 (79.77%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPV APKC H NNH DG MN  HRDEEVDY PSR+DP   AE+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R++ +W+++L DPRVTHE+ SIW+SY  QAD+S GQK+AS L V+P++
Sbjct:  320 EQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.323e-67
Identity = 118/173 (68.21%), Postives = 139/173 (80.35%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPV APKC H NNHYDG MNFMHRDEEVDY+PSR+ P  HA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+ +IWV+Y  Q D SLG K+A+ LNV+PS+
Sbjct:  320 EQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.323e-67
Identity = 118/173 (68.21%), Postives = 139/173 (80.35%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPV APKC H NNHYDG MNFMHRDEEVDY+PSR+ P  HA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+ +IWV+Y  Q D SLG K+A+ LNV+PS+
Sbjct:  320 EQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.473e-66
Identity = 114/175 (65.14%), Postives = 142/175 (81.14%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPV APKC  +NNHYDG MNFMHRDEEVDY+PSR+ P  HAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+ R+  AL  P+V+HE+  IW+ +  + D+S G K+A+ LNV+PS+
Sbjct:  320 EQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.250e-62
Identity = 111/175 (63.43%), Postives = 139/175 (79.43%), Query Frame = -3
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPV APKC  + NHYDG MNFMHRDEEVDY+PSR+ P  HAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+    + L  P+V+HE+  IW+ +  + D+S G K+A+ LNV+PS+
Sbjct:  319 EQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKKNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFV-ALRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CATA1_SOLLC6.531e-7068.79Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_WHEAT8.530e-7069.94Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA2_ORYSJ8.530e-7069.36Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA1_MAIZE1.609e-6868.79Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_SOLTU2.101e-6867.63Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA2_SOLTU6.113e-6867.05Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_ORYSJ2.323e-6768.21Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI2.323e-6768.21Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU7.473e-6665.14Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE2.250e-6263.43Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCTAAAACAGACTTTTATTAATTGACCCTCAGGA
AAAGAGTCACATAACATGCAAGTTTATTTTCTCTATTACAATATACAACA
GCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGGGTTCACT
CCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTG
ACACCTTCAAATGCTTGGCCTCACATTGAGACAAGAAGCTAGCTTCTGAC
CCAAAGATCTGTCGGCCTGAAACCAGTAAGAGACCCATATGCTGCCAACC
TCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAA
CCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCT
TGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATT
ACATCAGAAGGAATGGGATATCTCTCAGCATGACAAGTAGGATCATACCT
CGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAAC
CATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATAAACTGGAAGC
ATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAA
GATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCA
CGATACCAGGGTTAAATGCAAGCATTTCAT
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