CF835933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P +VPG+ YS DKMLQ R+F+YGD QR+RLG N+ +PV PK CP DG M F+ ++ Y+P+ Y+ ++ P P+D G + +N F+QPG+ +R + D +ER A+ V+ +V + + ++AD G+ +A L++ Sbjct: 311 EQAAFAPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--DGVSKDVKVRHIRHCYKADPEYGKGVAKALDI 485
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 56/173 (32.37%), Postives = 84/173 (48.55%), Query Frame = -3 Query: 219 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKE--NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 728 E AFNP VVPGI +S DKMLQ R+F+YGD R+RLG N+ ++PV A +CP + H DG M + + Y P+ Y + P I G ++ + + QPG +R P +Q+ +A+ D E+ V +AD + G +A L ++ Sbjct: 309 EQAAFNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHLIPVNAARCPVHSYHRDGAMRVDGNHGSTLAYEPNSYGEWQEQPDFAEPPLAIRGDAAHWNFREDDADYYDQPGRLFRLMTPQQQDELFQNTARAMGD--APEEIKRRHVGNCAKADPAYGAGVARALGLK 479
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMN----FMHRDE-EVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P ++PGI S D++LQ R+FAY DTQ +RLG N LPV +PK P N++ DG N + D +V+Y PSR ++ ++G ++ I +F Q G YRS + + ++ + + EV +I VSY+++AD+ G +LA +V Sbjct: 325 EQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETPLSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHN-LSGDLNKVNDAEVKAIMVSYFYRADKEYGTRLAKATDV 497
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMN----FMHRDE-EVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P ++PGI S D++LQ R+FAY DTQ +RLG N LPV +PK P N++ DG N + D +V+Y PSR ++ ++G ++ I +F Q G YRS + + ++ + + EV +I VSY+++AD+ G +LA +V Sbjct: 325 EQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETPLSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHN-LSGDLNKVNDAEVKAIMVSYFYRADKEYGTRLAKATDV 497
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 57/156 (36.54%), Postives = 78/156 (50.00%), Query Frame = -3 Query: 300 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKE-------------NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHE 728 E AF+P VVPGI YS D+MLQ R+F+YGDT R+RLG NY +PV P+CP ++ DG+M + +Y PS Y + A IEKE + + QPG+ YRS D +ER + ++L VTH+ Sbjct: 311 EQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPS------SLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHK 458
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 55/174 (31.61%), Postives = 86/174 (49.43%), Query Frame = -3 Query: 213 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMH-RDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPS 728 E AF P ++PGI S D++LQ R+FAY DTQ +RLG N LPV P N++ +G N + +V+Y PSR ++ + G ++ I K +F Q G YRS DR + N + + + ++ + VSY+++AD+ G +LA + S Sbjct: 325 EQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKAISKPRDFYQAGVLYRSMNEQDRSDLIAN--LAGDLNKVIDKDIKATMVSYFYRADKEYGSRLAEATDTNLS 496
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P +VPG+ YS DKMLQ R+F YGD QR+RLG N+ +PV PK CP DG M + ++ Y+P+ YD ++ P P+D G + +N F+QPG+ +R + + +ER A+ VT +V + + ++AD G+ +A L + Sbjct: 311 EQAAFAPTNIVPGLDYSPDKMLQGRLFPYGDAQRYRLGVNHWQIPVNQPKGVGIENLCPFSR---DGQMRILDDNQGGGPHYYPNNQGVYDSQPEFKKPPFPADG-DGYEYNQRQDDDNYFEQPGKLFRLQSDEAKERIFTNTANAM--DGVTEDVKRRHIRHCYKADPDYGKGVAKALGI 485
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 57/181 (31.49%), Postives = 92/181 (50.83%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P ++PG+ +S DKMLQ R+F+YGD QR+RLG N+ +PV PK CP DG M + ++ Y+P+ ++D ++ P P+D G + +N F+QPG+ +R + D +ER A+ VT +V + + ++AD G+ +A L + Sbjct: 311 EQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 57/181 (31.49%), Postives = 92/181 (50.83%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P ++PG+ +S DKMLQ R+F+YGD QR+RLG N+ +PV PK CP DG M + ++ Y+P+ ++D ++ P P+D G + +N F+QPG+ +R + D +ER A+ VT +V + + ++AD G+ +A L + Sbjct: 311 EQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 57/181 (31.49%), Postives = 92/181 (50.83%), Query Frame = -3 Query: 222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728 E AF P ++PG+ +S DKMLQ R+F+YGD QR+RLG N+ +PV PK CP DG M + ++ Y+P+ ++D ++ P P+D G + +N F+QPG+ +R + D +ER A+ VT +V + + ++AD G+ +A L + Sbjct: 311 EQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485 The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bpback to top |