CF835934

Overview
NameCF835934
Unique NameCF835934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.799e-57
Identity = 111/210 (52.86%), Postives = 141/210 (67.14%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT AGAPV ++ +S T G  GPVL++D  L+EKLAHF RERIPERVVHARGA A G F  T D+S  T A      G +T   +RFSTV    G+ + +RDPRG+A+KFYT EGN+DL+GN+ PVFFI+DAIKFPD IH  K +P +  QE   + DF    PES    +W F D GIP  YRHM G+G  T+   N+ G+V +VK+H+
Sbjct:    6 LTTEAGAPVADNQNSETAGVGGPVLVQDQLLLEKLAHFNRERIPERVVHARGAGAYGTFTLTRDVSRWTRAAFLSEVGKRTETFLRFSTVAGSLGAADAVRDPRGWALKFYTEEGNYDLVGNNTPVFFIKDAIKFPDFIHTQKRDPYTGSQEADNVWDFWGLSPESTHQVTWLFGDRGIPASYRHMNGYGSHTYQWNNEAGEVFWVKYHF 215          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.960e-56
Identity = 112/230 (48.70%), Postives = 148/230 (64.35%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +D +K+  S +    ++TT+AG P+  D+ SL  G RGP LLED+   +K+ HF  ER+PER VHARGA A G F    D +++T A    + G +TPV VRFSTV   RGS +T+RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD++HA KP+P S I +    +    DF S  P +L T  W     GIP+ YRHM+GFG  T  LV  +GK   VK+HW
Sbjct:   44 LDQFKVEDSNS----YLTTDAGGPI-QDDASLKAGERGPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAYGTFTSYADWTNITAASFLNSKGKETPVFVRFSTVAGSRGSADTVRDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLVHAVKPSPDSEIPQAATGHDSAWDFFSQQPSTLHTLFWAMSGHGIPRSYRHMDGFGVHTMRLVTDDGKSKLVKWHW 268          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.344e-56
Identity = 104/210 (49.52%), Postives = 147/210 (70.00%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT AGAPV ++ +  T G RGP+LL+D   +EKLAHF RE IPER +HA+G++A G F  THDI+  T A +F   G +T + +RFSTV  ERG+ +  RD RGF+++FYT +GNWDL+GN+ PVF++RD +KFPD+ H  K +P+++++      DF SHLPESL   +  F D G+P+ YRH+ GFG  TF+ +N N +  +VKFH+
Sbjct:    7 LTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHF 216          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.449e-56
Identity = 112/218 (51.38%), Postives = 140/218 (64.22%), Query Frame = 2
Query:  110 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            N  FMTT+ G  +  +  SL  G RG  LLED+   +KL HF  ERIPERVVHARGA A G F    D S++T A    A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IH+ KP+P + + +    +    DF S  P +L T  W     GIP+ YRHM+GFG  TF LV ++GK   VK+HW
Sbjct:   51 NGQFMTTDFGGNI-EEQFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHW 267          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.728e-56
Identity = 111/217 (51.15%), Postives = 140/217 (64.52%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI-------QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            + TN G  + ++ +SL  G+RGP LLED+ + EK+ HF  ERIPER+VHARG  A G+F+   + + LT A   + P   TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DAIKFPD +HA KP P + I         +W   DF S +PES     W   D  IP+  R MEGFG  TF L+N  G   +VKFHW
Sbjct:   44 LRTNQGVKIADNQNSLKAGARGPSLLEDFIMREKITHFDHERIPERIVHARGTGAHGYFQSYGNHADLTKAGFLQDPDKITPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFW---DFVSLVPESAHMVMWAMSDRAIPRSLRMMEGFGVHTFRLINAEGVASFVKFHW 257          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.659e-55
Identity = 104/210 (49.52%), Postives = 145/210 (69.05%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT AGAPV ++N+ +T G RGP+LL+D   +EKLAHF RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWD++GN+ PVF++RD +KFPD+ H  K +P+++++      DF SHLPESL   +    D G+P  YR + GFG  T++ +NK+ +  +VKFH+
Sbjct:    6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHF 215          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.167e-55
Identity = 109/212 (51.42%), Postives = 145/212 (68.40%), Query Frame = 2
Query:  116 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            P +TT AGAPV ++ +SLT G RG ++L+DY L+EKLAH  RERIPERVVHA+G  A G  + T DIS  T A   + PG +TP++ RFSTV  E+G+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD  KFPD IH  K +PK++++    + D+ S  PESL   +    D G+PQ   HM G+G  T++  N  G+ ++VKFH+
Sbjct:    5 PTITTTAGAPVPDNQNSLTAGPRGGIMLQDYQLIEKLAHQNRERIPERVVHAKGWGAFGSLKITGDISQYTRAKCLQ-PGAETPMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTNLRSATAMWDYWSLSPESLHQVTILMSDRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHF 215          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.697e-55
Identity = 106/210 (50.48%), Postives = 141/210 (67.14%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT AG PV ++ +  T G RGP LL+D   +EKLAHF RE IPER +HA+G+ A G F  THDI+  T A LF   G QT +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD +KFPD+ HA K +P+++++      DF + LPE+L   +    D GIP  YRHM GFG  TF+ +N + +  +VKFH+
Sbjct:    5 LTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKLFSEIGKQTELFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERFWVKFHF 214          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.396e-54
Identity = 104/217 (47.93%), Postives = 141/217 (64.98%), Query Frame = 2
Query:  104 THNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV-GIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            ++  P  TTN G P++N   +  VG  GPVLL+D HL++   HF RERIPERVVHA+G+ A G FECT DI+  T   +F   G +TP++ RFSTV  ERG+P+T RDPRGFA+KFYT EG +D++GN+ PVFF+RD  KFP  IH  K NP++ +++     D+ S   ES+      F D+ G P  YR M+GF   T+  VN  G+ +Y K+H+
Sbjct:    6 SNTVPVYTTNTGCPIFNPMAAARVGKGGPVLLQDSHLIDVFQHFDRERIPERVVHAKGSGAFGEFECTDDITKYTKHTMFSKVGKKTPMVARFSTVGGERGTPDTARDPRGFALKFYTDEGIFDMVGNNTPVFFLRDPAKFPLFIHTQKRNPQNDMKDATMFWDYLSQNAESIHQVMILFSDLGGTPYSYRFMDGFSSHTYKFVNDKGEFYYCKWHF 222          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 107/233 (45.92%), Postives = 140/233 (60.09%), Query Frame = 2
Query:   65 NIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI----QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            N  ++  +   +   N  + TTN G  + +D +SL  G RGP LLED+ L EK+ HF  ERIPER+VHARG  A G+F    D S LT AD       +TPV +R STV   RGS +T+RD  GFAVKFYT EGN+DL+GN++PVFFI+DA  FPD +HA K  P++ +      +    DFC   PES  +  W   D GIP   RH +GFG  ++  +N+ GK  +VK HW
Sbjct:    2 NKKLEQLEKFKTNDKNPVYSTTNTGVSLSDDANSLKAGPRGPTLLEDFVLREKITHFDHERIPERIVHARGTGAHGYFLSYKDHSKLTKADFLSKQDKKTPVFIRISTVQGPRGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQNEMPTGGSAHDTFYDFCGLKPESAHSVLWVMSDRGIPISLRHQQGFGVHSYRFINQEGKSTFVKLHW 234          
The following BLAST results are available for this feature:
BLAST of CF835934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
BCA_STRVL8.799e-5752.86Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_ERYGR1.960e-5648.70Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATA_PSEAE3.344e-5649.52Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CAT3_NEUCR7.449e-5651.38Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATE_PSEPU9.728e-5651.15Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_PROMI1.659e-5549.52Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_RHIME2.167e-5551.42Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_VIBF13.697e-5550.48Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATA_SCHPO2.396e-5447.93Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATB_DICDI4.087e-5445.92Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835934 ID=CF835934; Name=CF835934; organism=Citrus sinensis; type=EST; length=753bp
CTCGACTCAACTCCTCTTCTCCTTTCTTACGATAATAATAACAGTAGCAA
AATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCA
ACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTG
GAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTG
AGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATT
CCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGA
GTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTC
CAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAG
CGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTT
TTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTT
TTTTCATCCGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAA
CCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTG
CTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATG
TGGGTATTCCACAAGATTACAGGCACATGGAAGGCTTCGGTGATCAAACT
TTTACACTGGTCAATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTG
GAA
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