CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:628..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_MESSB (Anthranilate phosphoribosyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A+ L++ G ++A VVH +GLDEM+  G   +  +   ++  F   P + G+ R    +L+GG   YN + LRRVL GER               +V+ K  TL + VALA E   SG+AL  L+  +EVS
Sbjct:  145 EAGVGFMFAPSHHAAMRHVGPTRVELGTRTIFNLLGPLSNPAGVKRQLVGVFSAQWVEPLAHVLRQLGTEKAWVVHGDGLDEMTTAGVTRVASLEYGEVRTFEITPEEVGLQRSAAAALKGGDGEYNGKALRRVLEGERNAYRDIAVLNAGGALIVAGKAETLKDAVALASESIESGRALAALEKLVEVS 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.979e-31
Identity = 77/184 (41.85%), Postives = 103/184 (55.98%), Query Frame = -2
Query:  236 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 784
            +AGIGFM +  +H AMK V PVR  L +KT+FN+LGP+ NPA V   ++GV+    V   A AL+  G   A VVH S+G+DE++  GP  + ++    I  F   P D G+PR ++E L+GG P  NA  +RR+L GE G              +VS K  TL EG  LA +   SG A  TL
Sbjct:  145 KAGIGFMFAQAHHAAMKHVAPVRADLGIKTIFNMLGPLSNPALVKRQLLGVFAAEWVKPFAEALRNLGSDSAWVVHGSDGMDELTTTGPSAVAELKGGSIRVFEVTPEDAGLPRASIEDLKGGDPEQNAAAIRRLLDGEAGAYRDIVLLNTAAALIVSGKAATLKEGAGLAAKAIDSGAAKQTL 328          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.197e-31
Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   ++GVY    V+ +A  L+  G +   VVH  GLDE++  G   +  + Q KI  F   P D+G+ +  L +L+GG   YNA+ LR VL GE+               +++ K NTLA+G+AL  +   SG AL  L+  I VS
Sbjct:  145 EAGVGFMFAQLHHSAMRHVGPARVELGTRTIFNLLGPLANPAGVKKQLLGVYAPEWVIPLAETLRDLGSESIWVVHGNGLDEITTTGTTQVAALEQGKIRSFELTPGDFGVAQVELAALKGGDGEYNAKALRAVLEGEKNAYRDVALCNAAAALVIAGKANTLADGMALGAQSLDSGAALKRLETLITVS 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.788e-31
Identity = 81/194 (41.75%), Postives = 112/194 (57.73%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            +AGIGFM + K+HPAM+F  PVR+++ ++TVFNILGP+ NPA   + V+GV +  L  K+ANAL R     ALVVH + G+DE++  GP LI +V     + +    P D G+ R   E+L+GG  AYN  ++R +LSGE RG              +       LA GV +AR    SG+AL  L   I VS+
Sbjct:  144 DAGIGFMFAPKFHPAMRFAGPVRREIGIRTVFNILGPLTNPARARYQVLGVASAALAEKLANALSRLDTVHALVVHGDGGVDELTLSGPNLIFEVRAGHALRQMIVAPEDVGLERAPREALRGGDVAYNVALVRAILSGEDRGPRRDVVLLNAAAALVAGDVAPDLATGVKMARASIDSGRALERLHRMIAVSR 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.865e-31
Identity = 73/194 (37.63%), Postives = 110/194 (56.70%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP+ NPA V   V+GVY++ L   +A  L R G ++A+VVH  +GLDE++   P  + +V + K+  +  DP DYGIP   LE L+G     NA+++  +L GE+G               +   V  L EG+ +A  +  +G AL+ L   +E  + L
Sbjct:  144 EKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGPLTNPAFVKGQVLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEITTTSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLEGKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKVVEDLKEGIKVANYLIDTGLALDKLTEILEYQRRL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.865e-31
Identity = 73/194 (37.63%), Postives = 110/194 (56.70%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP+ NPA V   V+GVY++ L   +A  L R G ++A+VVH  +GLDE++   P  + +V + K+  +  DP DYGIP   LE L+G     NA+++  +L GE+G               +   V  L EG+ +A  +  +G AL+ L   +E  + L
Sbjct:  144 EKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGPLTNPAFVKGQVLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEITTTSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLEGKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKVVEDLKEGIKVANYLIDTGLALDKLTEILEYQRRL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PHEZH (Anthranilate phosphoribosyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.158e-30
Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGI F+ +  +H AM+ V P+R +L  +T+FN+LGP+ NPA     VVGV+ E  V  +A AL   G ++A VVH  GLDE++  G   + + +  K+  F+  P   G+ R  L  + GG PA NA+ LRR+L+GE G              LV+ KV TL EGV LA  +   G+A   L+  +E++
Sbjct:  146 EAGICFLFAPAHHSAMRHVSPIRAELGFRTIFNLLGPLTNPAGAQRQVVGVFAERWVKPLAQALGMLGSEKAWVVHGAGLDELTTTGETSVAEFSDGKVRLFTITPEAVGLRRAALADITGGSPAENAQALRRLLAGETGAYRDIVALNAAAAFLVADKVETLREGVELAGRVLDEGRAQAALERLVEIT 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_THETN (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.975e-30
Identity = 72/180 (40.00%), Postives = 105/180 (58.33%), Query Frame = -2
Query:  248 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKA 784
            E G+GF+ +  YH AMK V P+R++L  +TVFN+LGP+ NPA +   V+GVY+ NL   +A  L + G++RA+VVH  +GLDE++   P  + +V + +I  +  DPLD+ IP    E L+G GP  NAE++  +L G++G               V   V  L EGV LA  +  SG A
Sbjct:  144 EKGMGFLFAPLYHRAMKNVLPIRRELGTRTVFNLLGPLTNPAPIKGQVLGVYDRNLTHPIAEVLLKLGIERAMVVHGFDGLDEITTTAPTYVSEVKEGEIFDYVIDPLDFDIPYSKPEDLKGKGPRENAEIIIDILKGQKGPRRDIVVLNTAAALYVGKLVENLKEGVELAERLLNSGLA 323          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBL (Anthranilate phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.975e-30
Identity = 72/189 (38.10%), Postives = 107/189 (56.61%), Query Frame = -2
Query:  221 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 784
            + GI F+ +   H AMK+V+P R++LK++TVFN+LGP+ NPA     VVGVY   LV K+A AL + GLKRALVVH  +GLDE++  GP  + +V   K+  +   P  +G+ R  L +L+GG    NA ++R +L GER               + + +  T+   + +A     SG+A   L L +E
Sbjct:  155 KVGIAFLFAPAMHTAMKYVQPARRELKMRTVFNLLGPLTNPANASCQVVGVYTGQLVEKLAQALLQLGLKRALVVHGWDGLDEITISGPTKVAEVRDGKVTSYEISPEQFGLQRAPLSALEGGDAQVNAAIIRAILDGERSPKRDVVLLNAAAALVAAGQAETMGAAIPVAAYAIDSGQAKGRLRLLVE 343          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PETMO (Anthranilate phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.579e-30
Identity = 68/194 (35.05%), Postives = 109/194 (56.19%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E  I F+ +  +H A K     RK+L ++T+FN+LGP+ NPA + + ++G+Y+  LV  +A  L   G+KRA+VVH SEG+DE S  G   +  + + KIE+    P D G+ + +++ +QGG    N  ++  + +GE G               V+ KVN+L EG+  A+EI  SGKA+  L+  +E +  L
Sbjct:  144 EINIAFLFAQDFHKATKHAAVPRKELGIRTIFNVLGPLTNPANIKYQLMGIYDPKLVYPIAEVLNNLGVKRAMVVHGSEGIDEFSLSGKNKVAFLNEGKIEKLEISPEDLGLEKYSIQEIQGGSAEENKRIILNIFNGEMGPKRDVVVLNTAAGLYVANKVNSLEEGINFAQEIIDSGKAMKKLEEMVEFTNFL 337          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MESSB1.786e-3138.95Anthranilate phosphoribosyltransferase OS=Mesorhiz... [more]
TRPD_PARL13.979e-3141.85Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_AGRVS5.197e-3138.95Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_CHLAD6.788e-3141.75Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_THEPX8.865e-3137.63Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP38.865e-3137.63Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_PHEZH1.158e-3038.95Anthranilate phosphoribosyltransferase OS=Phenylob... [more]
TRPD_THETN1.975e-3040.00Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_ACIBL1.975e-3038.10Anthranilate phosphoribosyltransferase OS=Acidobac... [more]
TRPD_PETMO2.579e-3035.05Anthranilate phosphoribosyltransferase OS=Petrotog... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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