CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACWK (Anthranilate phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.260e-26
Identity = 68/193 (35.23%), Postives = 102/193 (52.85%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA++ +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S DP  YG  R   E ++GG    NA++   VLSGE+                 + +  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALRRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAEVLQKLGRKQALVVNGSGFLDEASLQGENHVVVLKDNEIVEMSIDPEKYGFSRVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLLNAGLALFANGRAETIEEGITLATHSIDSGKALAKLNLLIAASHEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26
Identity = 69/194 (35.57%), Postives = 105/194 (54.12%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E GIGF+ +   H +MK V PVR+++ ++ +FN+LGP+ NPA     ++GVY+ NL   +A  L   G+K ALVVH ++G+DE+S   P ++ ++    +  +   P D G+ R   E ++GG    NA +   VLSGE G              L + +V TL EGV LA +   SG+A   L+   E +  L
Sbjct:  143 EVGIGFLYAPALHTSMKHVAPVRREIGLRNIFNLLGPLTNPAMAQAQLMGVYDPNLTEPLARVLGNLGVKHALVVHGTDGVDEISISAPTVVSEMRDGFVHTYRVVPEDVGLSRAPREYIRGGTKEENARITESVLSGEPGPRRDVVLLNAAAALLAADRVRTLREGVELAAQSIDSGEARRVLERMREFTHRL 336          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26
Identity = 73/191 (38.22%), Postives = 102/191 (53.40%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  L+  G +   VVH S+GLDE++  GP  + ++   +I  F   P + G+PR   E+L+GG    NA  LR VL G                 +V+ K   L EGVAL  +   SG A   L   I V+
Sbjct:  145 EAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSESIWVVHGSDGLDEITLSGPTAVAELKNGEIRTFEVTPDEAGLPRAHAEALRGGDAEANAVALRSVLEGMPSPYRDVALLNAAAALVVAGKAKDLKEGVALGAKSIDSGAAEGRLRRLIAVT 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26
Identity = 65/180 (36.11%), Postives = 98/180 (54.44%), Query Frame = -2
Query:  245 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKAL 784
            E GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     V+GV+++ L   +A AL   G + ALVVH +G+DE++  G   + ++   K+  ++  P   G+ R   E ++GG P  NA  L  +  G++G               V   V ++ + + +A +   SGK +
Sbjct:  143 EIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGTKGQVIGVFDKKLCEPIAYALAELGTEHALVVHGDGMDEITNTGETYVAELKDGKVSTYTLTPEALGMLRANPEDIKGGTPKENARDLLCIFKGQKGPKRDIVVMNAAAALYVGGIVGSIRQAIPIAEDAIDSGKVM 322          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26
Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = -2
Query:  245 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKAL 778
            GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++ L   +A AL   G + ALVVH +G+DE+S  G   + ++   ++  ++  P   G+ R   E ++GG P  NA  L  +  G++G               VS  V ++ + + +A +   SGK +
Sbjct:  148 GIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKKLCEPIAYALAELGTEHALVVHGDGMDEISNTGETFVAELKDGEVSTYTITPEAMGMLRAKPEDIKGGTPKENARDLLCIFKGQKGPKRDLVILNAAAALYVSGIVGSIRQAIPIAEDAIDSGKVM 325          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26
Identity = 73/191 (38.22%), Postives = 103/191 (53.93%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            E GIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   +I  F   P + G+PRC   +L+GG    NA  L+ VL+G+                +V+ +   L EGVAL  +   SG A   L   I VS
Sbjct:  145 ECGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITLTGPTFVSSLHNGEIRNFEVTPEEAGLPRCEPGALKGGDADANAIALQSVLNGKPSAYRDVALMNAAAALVVAGRAKDLKEGVALGAKSLDSGAANARLKHLIAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LEUMM (Anthranilate phosphoribosyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26
Identity = 65/184 (35.33%), Postives = 103/184 (55.98%), Query Frame = -2
Query:  236 AGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 781
            AG  F+ +  +HPAMK+V  +RK L  +T+FNILGP+ NP      +VGVY + L++ +AN L   G++ A++VH  +GLDE++      +  ++   I   +FDP DYG    ++ESLQGG P  NA++   +L+G+  G               ++ K  ++   + LARE  ++G AL  L
Sbjct:  146 AGQTFLFARSFHPAMKYVGSIRKSLGFRTIFNILGPLTNPTRPRTMLVGVYTKELLVPLANVLSELGVQEAILVHGQDGLDEVTLTTKTDLAILSNGHIREATFDPQDYGFDYVSIESLQGGTPIENAKITEHILAGKITGPMADTAILNAALALFIAKKAQSIDAAIQLARETLINGTALGQL 329          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DECAR (Anthranilate phosphoribosyltransferase OS=Dechloromonas aromatica (strain RCB) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26
Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            E G GFM +  +H AMK V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV  +   +QR G +R LVVH +  LDE+S     ++ ++   +I  +   P DYG+   +L +L+ G  A + E+L  VL  + G               V+   +++ +G+  ARE   SG A   LD +I  +K
Sbjct:  146 ETGFGFMFAPNHHTAMKHVAPVRREMGVRTIFNILGPLTNPAGAPNTLMGVFHPDLVGILVRVMQRLGAERVLVVHGKDCLDEISLGAATMVGELNNGEIREYEIHPEDYGLQMQSLRNLRVGSAAESREMLLGVLGNQPGPAREIVCLNAGAALYVANVADSIGDGIVRAREAIASGAARAKLDQFINATK 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CAUSK (Anthranilate phosphoribosyltransferase OS=Caulobacter sp. (strain K31) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26
Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  248 AGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKA 781
            AGI F+ +  +H AMK V P+R++L  +T+FN+LGP+ NPA     VVGV     V  +A AL   G +RA  VH  G+DE++  G   + +     +  F+  P   G+PR  L  + GG PAYNA  L  +L G++G              LV+ +V TL EGV LA  +   G+A
Sbjct:  147 AGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGPLTNPAGAKRQVVGVSAHRFVEPVAKALGALGAERAWSVHGAGMDELTTTGETEVAEWRDGSLRLFTITPEAVGLPRAALADITGGDPAYNAAALTALLDGQKGAYRDIVMLNAAAAFLVADRVETLREGVELAGAVLDDGRA 324          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_AGRT5 (Anthranilate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26
Identity = 64/190 (33.68%), Postives = 102/190 (53.68%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA     ++GV++   ++ +A  L+  G +   VVH +G+DE++  G   +  +   KI  F   P D+G+    +  L+GG    NA  LR VLSG+R               +++ K  TL++ + +A +   SGKA   LD  + VS
Sbjct:  145 EAGLGFMFAQMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPAGAKRQLLGVFSPRWLVPLAEVLRDLGSESIWVVHGDGMDEVTTTGVTHVAALEDGKIRTFDLTPKDFGVEPALMNDLKGGDGIANAAALREVLSGKRNAYRDISLCNAAAALVIAGKAETLSQAMTIASDALDSGKAAAALDRLVAVS 334          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACWK2.260e-2635.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_SYMTH2.951e-2635.57Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_RHOPS2.951e-2638.22Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_METBF2.951e-2636.11Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_METAC2.951e-2637.08Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_BRAJA2.951e-2638.22Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_LEUMM3.854e-2635.33Anthranilate phosphoribosyltransferase OS=Leuconos... [more]
TRPD_DECAR3.854e-2634.90Anthranilate phosphoribosyltransferase OS=Dechloro... [more]
TRPD_CAUSK3.854e-2637.64Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_AGRT53.854e-2633.68Anthranilate phosphoribosyltransferase OS=Agrobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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