CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            EA +GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   ++GV++   ++ +A  ++  G +   VVH +GLDE++  G   +  +   KI  F   P D+G+  C L  ++GG    NA  LR VL G +               ++S KV T+ +G+ LA     SG     LD  I VS  +
Sbjct:  145 EASVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGPLSNPAGVRRQLLGVFSPQWLVPLAEVMRDLGSECVWVVHGDGLDEITTTGITKVAALEDGKIRTFELSPADFGVSPCVLADIKGGDGVANAAALREVLGGAKNAYRDVSLANAAASLVISGKVETIRDGMKLAAHSLDSGATALALDKLIAVSNDI 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PERMH (Anthranilate phosphoribosyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = -2
Query:  212 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 778
            G+GF+ +  YHPAMK V   R+++ V+T+FNILGP+ NPA   + ++GVY+++LV  +A  L   G++RA VVH  EGLDE+S     ++ +V    I  +S  P D+GI R +L+ ++GG   +N ++   +L G +R                    V+++ EG+ LA+E   S KA   L+   E SK
Sbjct:  147 GLGFLFAPVYHPAMKNVIRQRREIGVRTIFNILGPLSNPAGAKYQLLGVYDKDLVEPVARVLSLLGIERAYVVHGMEGLDEVSITTDTMVAEVDGGDISVYSVKPEDFGIERASLDDIRGGDLDFNLQIALDILEGKDRSRKTDFVSLNAGFAFHAVGVVDSVKEGIELAKETIYSKKAYEILEKLREYSK 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METBU (Anthranilate phosphoribosyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 64/188 (34.04%), Postives = 102/188 (54.26%), Query Frame = -2
Query:  221 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 784
            + GIGFM++ K+HPAMK +   RK+L V+T+FNILGP+ NP      V+GV++++L   MA  L++ G +  +V H +G+DE+S L    + ++    I  ++  P + G+ R     + GG P  NA  L  +L+GE+G               V+    ++ + + LA E   S KALN L   +E
Sbjct:  143 DIGIGFMLAPKFHPAMKRMVGPRKELAVRTMFNILGPLTNPTGAKAQVIGVFDKDLCNLMAEVLKKLGKEHVMVFHGDGMDEISTLSETFVAELKDGIISNYTLTPEELGVARAKATDIVGGTPEENAHDLLYILNGEKGAKRDIVVVNAAAAIYVAGLAISIKDAIPLAEEAIDSRKALNKLKELVE 330          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METB6 (Anthranilate phosphoribosyltransferase OS=Methanoregula boonei (strain 6A8) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 67/183 (36.61%), Postives = 92/183 (50.27%), Query Frame = -2
Query:  236 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 784
            E GI F+ +  +HPAMK V   R+ L  +TVFN+LGP+ NPA     V+GVY++ L   MA  L   G+ RA+VV   GLDE++  G   + ++   +I  +   P  +G  R     L GG P  NA ++R +L G  G               V  +  TLAEG+  A E   SGKA   L
Sbjct:  146 ETGIIFLFAPSHHPAMKHVMATRQDLGCRTVFNLLGPLANPAGAAAQVLGVYDQKLTGPMAEVLSLLGVSRAMVVFGSGLDEITVTGETSVTELANSRITNYIVTPEQFGFTRAAPGDLLGGDPEKNARIIRAILDGAPGPARDIVLMNAGAAIYVGGRAATLAEGIRHAAESIDSGKAAGKL 328          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = -2
Query:  236 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGG-GPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 784
            E GIGF+ +   H AMK     R+++ ++T+FNILGP+ NPA     ++GV+  +L   +A  L R G +R+LVV  EG +DEM+  G   I D    ++  ++ +P D G+ R  +  + GG  P  +A+ +R VL+GE+G              L + +V T+ EGV +AR++  SG AL  L
Sbjct:  157 EIGIGFLFAPLLHAAMKHAIVPRREMGIRTIFNILGPLTNPAGANVQLIGVFERSLTTVLAEVLLRLGERRSLVVWGEGNMDEMTVTGTSYIADAHDGRVTSYAVEPEDVGLARAAVADISGGRTPEESAQQVRAVLAGEKGARLDMVLLNAGAALLAAGRVETIVEGVVMARDVVESGAALKKL 341          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DEIGD (Anthranilate phosphoribosyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 68/184 (36.96%), Postives = 96/184 (52.17%), Query Frame = -2
Query:  236 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLS-GERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 784
            E GIGFM +  YHPA++   PVR  L  +TVFNILGP+ NPA     VVGVY   L   +A  L+  G K A VV+  GLDE +  GP  +  +   ++   +  P + G+     E++ GG PA NAE+ R +L+ G                   + +V ++A+GVA ARE+  SG   + L
Sbjct:  156 ELGIGFMFARNYHPALRHAAPVRADLAARTVFNILGPLANPAGASHLVVGVYRPELTRMLAEVLRLLGAKGATVVYGSGLDEFTVCGPNTVTGLRNGELICRTMHPEECGVSLHPKEAIVGGSPAENAEITRALLTGGGTPAQRDIVALNAGAALRTAEQVESIAQGVARAREVMASGAGWDLL 339          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25
Identity = 69/185 (37.30%), Postives = 102/185 (55.14%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            E GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  +VGV++ +LV     ALQR G +  LVV+  +G+DE S     L+ ++   +I  +   P D+G+   +  +L+   P  + ++L  VL G+ G                +    ++A G+ALAR    SG AL  L+
Sbjct:  148 EVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAEAPHVLVGVFHPDLVGIQVRALQRLGAEHVLVVYGRDGMDEASLGAATLVGELKNGQISEYDIHPEDFGLAMTSNRALKVDTPEQSRDMLLGVLRGQPGAAHDTVCLNAGVALYAANVAESIAAGLALARAAIASGAALAKLE 332          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25
Identity = 64/190 (33.68%), Postives = 103/190 (54.21%), Query Frame = -2
Query:  212 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 778
            GIGF+ +   H AM++    R+++ ++T+FNILGP+ NPA     V+GVY   LV K+A  L R G +   VVH  +G+DE++     LI +VT   +   +  P + G  RC+++ L+GG    NA+++R VL G  G              + + +  T  + +ALA E   SG+A+  L   I+++K
Sbjct:  160 GIGFLFAPALHGAMRYAIGPRREIGIRTIFNILGPLTNPAGADCQVMGVYRPGLVEKLAGVLHRLGCRHGFVVHGMDGMDEITTTTETLIAEVTTSGVSICTIHPEELGFSRCSMDELRGGDATANADIVRSVLQGVAGPRRDIVLINAAYALVAADRAATPEQAIALAAEAIDSGRAMEQLRKLIQITK 349          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LACC3 (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25
Identity = 61/185 (32.97%), Postives = 104/185 (56.22%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            E  + F+ + +YH +MK+V  VRK+L  +T+FNILGP+ NPA     ++GVY+E L+  +AN L++ G+  A+VVH  +GLDEM+      ++++  + + +++  P  +G+ R     L GG P  NA++ RR+L+G+ G               V+    ++  G+ LA +    GKA   L+
Sbjct:  143 ENNLAFLFAQEYHKSMKYVATVRKQLGFRTIFNILGPLANPAHPTHQLLGVYDETLLEPLANVLKKLGVTNAMVVHGRDGLDEMTTADETAVVELQDDHLTKYTVTPEQFGLKRRQRADLVGGTPEANADITRRILAGDHGPQRDIVLLNAGAALHVAHPALSIQAGIDLAAKTIDDGKAFEELN 327          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CLOAB (Anthranilate phosphoribosyltransferase OS=Clostridium acetobutylicum GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25
Identity = 64/180 (35.56%), Postives = 101/180 (56.11%), Query Frame = -2
Query:  248 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKA 784
            E G+ F+ +  YH AMK V PVRK L  KT+FN+LGP+ NP  +   V+GV+++ L   +A  L + GL++A+V++  +GLDE++  G   + ++   +I+ +   P D+GI R  +E ++GG P  NAE++  +L G+ G               +      L +GV LA  I  SGKA
Sbjct:  144 EKGMAFIFAQSYHKAMKNVAPVRKSLGFKTIFNLLGPLTNPCNIGGQVLGVFDQKLTHPLAEVLLKCGLEKAMVLNGCDGLDEITITGSTFVSEIKDGRIKDYVIKPEDFGIKRSKIEDVRGGTPKENAEIIIDILKGKGGPKRDIAVLNAAAALYIGKITENLKDGVRLACNIIDSGKA 323          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHIE68.587e-2633.68Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PERMH8.587e-2636.13Anthranilate phosphoribosyltransferase OS=Persepho... [more]
TRPD_METBU8.587e-2634.04Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_METB68.587e-2636.61Anthranilate phosphoribosyltransferase OS=Methanor... [more]
TRPD_DESPS8.587e-2635.68Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_DEIGD8.587e-2636.96Anthranilate phosphoribosyltransferase OS=Deinococ... [more]
TRPD_VEREI1.121e-2537.30Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_PELPD1.121e-2533.68Anthranilate phosphoribosyltransferase OS=Pelobact... [more]
TRPD_LACC31.121e-2532.97Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_CLOAB1.121e-2535.56Anthranilate phosphoribosyltransferase OS=Clostrid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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