CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 55/138 (39.86%), Postives = 87/138 (63.04%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            E G+ F+ + KYH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVHS G+DE+S   P ++ ++   +I+ +     D+G+     E L GG P  N ++L R+L G+
Sbjct:  342 ELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGK 479          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SHESW (Anthranilate phosphoribosyltransferase OS=Shewanella sp. (strain W3-18-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 66/186 (35.48%), Postives = 97/186 (52.15%), Query Frame = -2
Query:  215 FMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVS 769
            F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LVL +A  L+  G KRA+VVH  GLDE++  G  L+ ++    I  +   P D G+P   +  L+GG PA NA +   +L G                 L  C + +++  G  LA     SGKA   L    +VS
Sbjct:  158 FLFAPHYHGGVKHAGPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTLVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILRGRGTDAHANAVAINAGCALYVCGIADSVKAGTLLALSTIQSGKAFELLSQLAKVS 343          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = -2
Query:  215 AGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 781
            AGIGFMM+  +H AM+ V   R +L  +T+FN+LGP+ NPA V   ++GV+++  +  +A  LQ  G K   VVH S+GLDE++  GP  +  +    I  F+  P   G+P+ TL  L+GG P  NA  LR  L G++               +++ K   L EGV +  +   SG A   L   + +S
Sbjct:  146 AGIGFMMAQTHHTAMRHVASARVELGTRTIFNLLGPLCNPAGVTRQLLGVFSQAWLEPLAQVLQALGGKHVWVVHGSDGLDELTTTGPSFVTALEDGAIRSFTITPEMAGLPQATLADLKGGDPETNAAALREALGGKKSAYRDIALLNAAAALVIAAKAKDLKEGVLIGAKAVDSGAASAVLAKLVALS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACHK (Anthranilate phosphoribosyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACCZ (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPVMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPKKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACCQ (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain Q1) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACC7 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain AH187) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACC3 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain 03BB102) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACAH (Anthranilate phosphoribosyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEKL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_AZOC5 (Anthranilate phosphoribosyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            E GIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV+ +  +  +A  L+  G +RA VVH S+GLDE++  G   +  +   ++  F   P D G+ R   E+L+GG   +NA  LR VL G  G              L+S +  +L +GV +A+    SG A   LD
Sbjct:  145 ETGIGFMFAPTHHPAMKNVGPTRVELGTRTIFNLLGPLSNPAGVKRQMVGVFAKAWLSPLAEVLKALGSERAWVVHGSDGLDEITISGTTDVASLEDGRVHTFEISPEDVGLTRAAPEALRGGDAEHNAAALRAVLEGAPGAYRDVAVMNAGAALLISGRAASLRDGVDMAKASIDSGAAKAKLD 329          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPG_ECOLI1.465e-2539.86Anthranilate synthase component II OS=Escherichia ... [more]
TRPD_SHESW1.465e-2535.48Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_BEII91.465e-2535.26Anthranilate phosphoribosyltransferase OS=Beijerin... [more]
TRPD_BACHK1.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACCZ1.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACCQ1.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC71.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC31.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACAH1.465e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_AZOC51.465e-2537.84Anthranilate phosphoribosyltransferase OS=Azorhizo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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