CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_ANADE (Anthranilate phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = -2
Query:  236 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTL 784
            E GIGF+ + + HPA K +  VR++L V+T+FN+LGP+ NPA     V+GVY    V  +   L   G   A VVH EGLDE++  G   + +V    +ER++  P D G+PR     L GG  A NA ++  VL G++G              + +     L +GVA A     SG A   L
Sbjct:  144 EVGIGFLFAVRLHPAFKAIAGVRRELGVRTIFNLLGPLANPAGARHQVLGVYEARWVPVLGGVLAALGAAHAFVVHGEGLDEIAVTGMTHVCEVKDGAVERYTIRPEDLGLPRRDAAELAGGDAAANARIVTHVLEGQQGGPRDAVLANAAAALVCAGAATDLRDGVARAARSIDSGAAREKL 326          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPG_SALTY (Anthranilate synthase component II OS=Salmonella typhimurium GN=trpD PE=1 SV=4)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            E G+ F+ + KYH  ++   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVHS G+DE+S   P ++ ++   +I+ +     D+G+     + L GG P  N ++L R+L G+
Sbjct:  342 ELGVCFLFAPKYHTGLRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGK 479          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SHEB8 (Anthranilate phosphoribosyltransferase OS=Shewanella baltica (strain OS185) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 67/192 (34.90%), Postives = 99/192 (51.56%), Query Frame = -2
Query:  197 FMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVSKHLLVH 769
            F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LVL +A  L+  G KRA+VVH  GLDE++  G   + ++    I  +   P D G+P   +  L+GG PA NA +   +L G                 L  C + +++  G  LA     SGKA   L    +VS   LV+
Sbjct:  160 FLFAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTQVAELKDGDIVEYQLTPADLGVPLAQITDLEGGEPAQNALITEAILKGRGTEAHANAVAINAGCALYVCGIADSVKAGTLLALATIQSGKAFELLSQLAKVSGEALVN 351          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SHEB5 (Anthranilate phosphoribosyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 67/192 (34.90%), Postives = 99/192 (51.56%), Query Frame = -2
Query:  197 FMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVSKHLLVH 769
            F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LVL +A  L+  G KRA+VVH  GLDE++  G   + ++    I  +   P D G+P   +  L+GG PA NA +   +L G                 L  C + +++  G  LA     SGKA   L    +VS   LV+
Sbjct:  160 FLFAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGRGTEAHANAVAINAGCALYVCGITDSVKAGTLLALATIQSGKAFELLSQLAKVSGEALVN 351          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 68/191 (35.60%), Postives = 103/191 (53.93%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+ F+ +  +HPAM+ V  VR +L V+T+FN+LGP+ NPA V + + GV    L   +   L   G +R   VH S+GLDE++  GP  ++ + + ++  F+ DP ++G+     E L+GG PA NA  L  VL+G R               +V+     LA+GVA A++   SG A  TL   +  S
Sbjct:  145 EAGLCFLFAQAHHPAMRHVAAVRSELPVRTIFNLLGPLSNPAGVGYQLFGVAQAALAEPLTRVLAELGSRRVWTVHGSDGLDEITVTGPTQVVALDEGRLCHFTIDPREFGLALRAPEELRGGDPADNARSLEAVLAGARNAYRDIAVLNAGAALVVAGAAQALADGVAQAQDAVDSGAARATLARLVRAS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METNO (Anthranilate phosphoribosyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 70/191 (36.65%), Postives = 99/191 (51.83%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            +AG+ FM +  +H +M+ V PVR +L  +T+FN+LGP+ NPA V   + GVY  +L   +   L   G  R   VH S+GLDE++  GP  ++ +    I RF+ DP + G+     E L+G  P +NA  LR VL G R               +V+     L EGVA A +   SG A  TLD  + VS
Sbjct:  145 QAGLCFMFAQTHHASMRHVAPVRVELGTRTLFNVLGPLCNPAGVSGQLFGVYAASLAEPLTRVLADLGSTRVWTVHGSDGLDEITTTGPTAVVALEDGAIRRFTIDPRELGLALAAPEDLRGADPEHNAAALRAVLDGARTPYRDIAVLNAAAALVVAGAAANLGEGVARAAQAVDSGAARATLDRLVAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LACCA (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 54/141 (38.30%), Postives = 90/141 (63.83%), Query Frame = -2
Query:  365 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 784
            E  + F+ + +YH +MK+V PVRK+L  +T+FNILGP+ NPA     ++GVY+E L+  +AN L++ G+  A+VVH  +GLDEM+      ++++  + + +++  P  +G+ R     L GG P  NA + RR+L+G+ G
Sbjct:  143 ENNLAFLFAQEYHKSMKYVAPVRKQLGFRTIFNILGPLANPAHPTHQLLGVYDETLLEPLANVLKKLGVTNAMVVHGRDGLDEMTTADETAVVELQDDHLTKYTVTPEQFGLKRSQRADLVGGTPEANANITRRILAGDHG 283          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 70/193 (36.27%), Postives = 104/193 (53.89%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            E GIGF+ +  +H AMK+    RK+L V+T+FN+LGP+ NPA     V+GV+   L    A+AL   G +RA VVH  +GLDE+S      + ++   +++ +   P  +   R   E + GG P+ NA++ R +LSG E+G              + + K   L  GVALA +I  SGKA   L+  IE +K
Sbjct:  144 EIGIGFLFAPLFHGAMKYAIVPRKELGVRTIFNMLGPLTNPAAANCQVLGVFAPQLTEMFADALNLLGARRAFVVHGHDGLDEISVCASTRVSELNDGRVQTYDISPEHFFEDRARPEDMAGGTPSENAQITRHILSGKEKGPRRNVVVVNAGAALVAAGKAEDLKAGVALAGQIIDSGKAHEKLEQLIEFTK 336          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACC0 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain AH820) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEEL 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BACAN (Anthranilate phosphoribosyltransferase OS=Bacillus anthracis GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  203 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 778
            GI F+ +   HPA+K +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S +P  YG      E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S   L
Sbjct:  145 GIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAQVLQKLGRKQALVVNGSGFLDEASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEEIRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLALFANGKAKTIEEGITLAAHSIDSGKALAKLNLLIAASNEEL 337          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ANADE1.465e-2536.07Anthranilate phosphoribosyltransferase OS=Anaeromy... [more]
TRPG_SALTY1.913e-2539.13Anthranilate synthase component II OS=Salmonella t... [more]
TRPD_SHEB81.913e-2534.90Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_SHEB51.913e-2534.90Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_METRJ1.913e-2535.60Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METNO1.913e-2536.65Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_LACCA1.913e-2538.30Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_DESOH1.913e-2536.27Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_BACC01.913e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACAN1.913e-2535.23Anthranilate phosphoribosyltransferase OS=Bacillus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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