CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:628..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.369e-30
Identity = 71/189 (37.57%), Postives = 111/189 (58.73%), Query Frame = -2
Query:  221 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 784
            E  + F+ +  YH AMKFV  VRK+L ++T+FNILGP+ NPA     V+GVY+E+LV  +   L+  G+K AL V+  +GLDE+S      + ++   +++ +   P D+G+ RC+ E L GG P  NAE+   +L+G++G               V+ K +++ +GV LA EI  SG+A   L+ +IE
Sbjct:  143 EINLCFLFAQNYHLAMKFVAGVRKELSIRTIFNILGPLTNPAGATMQVLGVYDESLVKPLCEVLKNVGVKSALSVYGQDGLDEISVSDKTSVCELRDGRLKCYEIAPEDFGMERCSKEDLVGGNPRENAEITLSILNGQKGPKRNAVVLNSAAALYVAGKADSIEDGVRLASEIIDSGRAKKQLEKFIE 331          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_UNCTG (Anthranilate phosphoribosyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.400e-30
Identity = 71/191 (37.17%), Postives = 114/191 (59.69%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            + G+ F+M+  +H +MK+V  VRK+L ++T+FNILGP+ NPA   + ++GVY+ENLV  +A+ L   G+KRA+VVH  +GLDE++      I +V + ++  F   P  +G+ RC+L  L GG P  N E+   +L+GE+G               +     TL + + +A+++  S KALN LD +I+ S
Sbjct:  143 KVGMCFLMAQTFHSSMKYVAKVRKELGIRTIFNILGPLANPAKASYELIGVYDENLVEPIASVLVNLGVKRAMVVHGHDGLDEITLSDTTTICEVNRGRLNSFFITPEQFGLKRCSLSELIGGTPQENREIALNILNGEQGAKRDTVVLNSAVCLYMFYDNMTLKQCLRMAQDMIDSKKALNKLDEFIKAS 333          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PSEHT (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.400e-30
Identity = 69/191 (36.13%), Postives = 105/191 (54.97%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG-XXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            + G  F+ + +YHP ++    VR  LK +T+FNILGP++NPA     ++GVYN NL L MA  L+  G KRA++VH  G DE++  GP  ++++    I  ++ +P D+ +   +LE L G GP YNA V   +L G+                  +S K  +L +G      +  SG+A+NTL+  IEVS
Sbjct:  163 QTGFTFLFAPQYHPGVRHAMGVRTALKTRTIFNILGPLVNPAAPEVQLLGVYNPNLCLPMAQTLRTLGTKRAMIVHGSGTDEIALHGPTTVVELNNGNISEYTLNPSDFDLANYSLEQLTGEGPQYNANVSLAILQGKGDEAHNAAIIVNVAALLYLSGKAQSLKDGAHKVHTLLSSGQAMNTLNAIIEVS 353          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30
Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF-GLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E GIGFM +  YHP++K + P+RK +K  +VFNILGP+LNPA   +A++GV NE ++  M+    +F   KR  + H  GLDE++ LG  +  D+ Q K  R   DP   G   C +E L+GG    NA +L++   G++                V     TL EG+  AR+  + G+AL  L  W   S+ L
Sbjct:  142 EVGIGFMFAPIYHPSLKKLAPIRKGMKFPSVFNILGPLLNPANTEYALIGVSNEPILELMSEVCLKFKNTKRTFLFHGSGLDELTTLGKVVGYDIQQGKKTRLEIDPTSLGFNSCKIEDLKGGNSKLNACILKKAFMGQQSAIADALIFNAGAAMWVFGNAATLEEGIHSARKTLMEGEALRVLAQWAAFSQQL 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_METMJ (Anthranilate phosphoribosyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 68/189 (35.98%), Postives = 109/189 (57.67%), Query Frame = -2
Query:  215 AGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 781
            AGI F+ +  YHPAM++ R  R+++ ++TVFN+LGP+ NPA     ++GVY+  L L +A  L   G +RA+VVH  GLDE++  GP  + ++   ++  ++ D  ++G+PR ++ +L+GGGP  NA  L  VL+GE G               +  K + +A G+A A     SG AL+ L   +E +
Sbjct:  146 AGIAFLFAPAYHPAMQYARIARQEIGIRTVFNLLGPLTNPAGAGAHLLGVYDPCLTLPVARVLGDLGAERAMVVHGAGLDEIATAGPTTVAELRGGEVTTYTLDCTEFGVPRSSVAALRGGGPEENAATLLAVLAGEEGPARDIVLLNAGAAIYLGGKADGIAGGIAHAEASLDSGAALDRLRRLVEAT 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_HYPNA (Anthranilate phosphoribosyltransferase OS=Hyphomonas neptunium (strain ATCC 15444) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 73/191 (38.22%), Postives = 103/191 (53.93%), Query Frame = -2
Query:  212 AGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 781
            AG+GF+ +  YH AM+ V P+R KL ++T+FN+LGP+ NPA   ++V+GVY++  V  MA AL+  G + A VVH   G+DE+S  GP  + +VT   I  F   P D G+P   L +L+GG P  N   +R +L G  G               VS  V  L  GV  A +   SG A  TL+  +  S+
Sbjct:  148 AGVGFLFARSYHSAMRHVAPIRHKLGIRTIFNLLGPLSNPAGAEYSVLGVYDKQWVTPMAEALKALGTRCAWVVHGLAGIDEISISGPTDVCEVTPASIRHFQITPSDAGLPSHPLSTLEGGAPEENTAAIRDLLDGREGPFRDIVLINAAAGLHVSGMVADLPAGVQRAAQAIDSGAARETLNTLVRTSR 338          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            EAGIGF+ +   H AMKF    RK++ ++T+FNILGP+ NPA  P  V+GVY E LV K+A+ L+  G +R  VV+  +G+DE++      + +VT E+++ + F P D G  RCT++ L+GG    NA  +R +L GE+G              + + +    AEGV LA E   SG AL  L+
Sbjct:  158 EAGIGFLYAPALHGAMKFAIGPRKEIGIRTIFNILGPLTNPAGAPCQVLGVYREELVEKLAHVLKNLGCRRGFVVYGMDGMDEITLTTETRMAEVTPEEVKAWLFKPEDLGFARCTMDDLRGGDAVANAVTVRGILEGEKGPKRDVVLINAAFGLVAAGRAANPAEGVKLAVEALDSGAALAKLE 342          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DESHY (Anthranilate phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 72/183 (39.34%), Postives = 110/183 (60.11%), Query Frame = -2
Query:  233 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALV-VHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 778
            G+ F+ +  YHPAM  V   R++L ++T+FN+LGP+LNPA  P+ ++GV + +L+ KMA ALQ  G KRA+V V  +GLDE++  G    + +   +I+ F   P +YG+  C+L+ LQGG PA N ++  R+L G++G                + K   + EG+ALA E   SGKAL+ L+
Sbjct:  148 GMTFLFAQVYHPAMAKVAAERRELGIRTIFNLLGPLLNPAGAPYQLLGVSSPSLLPKMAKALQILGSKRAVVAVGEDGLDEVTLTGATQAILIDGGEIQPFIIRPEEYGLNLCSLQDLQGGTPAENGQITLRILQGKKGPQRDIVLLNAGTALYAANKAAGIREGIALAAESLDSGKALSILE 330          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.280e-29
Identity = 68/195 (34.87%), Postives = 111/195 (56.92%), Query Frame = -2
Query:  203 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 784
            + GIGF+ +  +H +MK     RK+L ++T+FNILGP+ NP+     V+GV+N NL   MAN L   G++RA+V+H  +G+DE++      + +V   ++  +   P +YGI   + E L GG    NA+++RR+ +GE+G               V   V+++ EG+ LA E+  SGKAL  LD ++E +   +
Sbjct:  144 KVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGPLTNPSNAKGQVLGVFNPNLTELMANVLLNLGIERAMVIHGMDGMDEITTTTSTKVSEVRNNEVITYELFPENYGIALASPEDLTGGNAEENAQIIRRIFNGEKGPKRDIVVLNSAAALYVGKVVSSIEEGIGLAEEVIDSGKALQKLDEFVEFTNSFI 338          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.672e-29
Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = -2
Query:  224 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 784
            E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  142 ELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METS33.369e-3037.57Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_UNCTG4.400e-3037.17Anthranilate phosphoribosyltransferase OS=Uncultur... [more]
TRPD_PSEHT4.400e-3036.13Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]
TRPD_CHLCV5.746e-3036.60Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_METMJ7.505e-3035.98Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_HYPNA7.505e-3038.22Anthranilate phosphoribosyltransferase OS=Hyphomon... [more]
TRPD_GEOSF7.505e-3039.46Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_DESHY9.802e-3039.34Anthranilate phosphoribosyltransferase OS=Desulfit... [more]
TRPD_CLOTH1.280e-2934.87Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_THETH1.672e-2940.96Anthranilate phosphoribosyltransferase OS=Thermus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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