CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:628..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DESRM (Anthranilate phosphoribosyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.298e-29
Identity = 70/195 (35.90%), Postives = 106/195 (54.36%), Query Frame = -2
Query:  203 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 784
            + GI F+ +   H AMK+    RK++ ++TVFNILGP+ NPA     V+GVY+ +L   +A  L   G KR+ V+H   GLDE+S  G  L+ +V   +++    DP+DYG+ R  + +L GG    NA +++ +LSG  G              +    V  LA G+ LA +I   G AL  L+L +E S+ L+
Sbjct:  144 QVGIAFLFAPLLHGAMKYAAAPRKEIGIRTVFNILGPLTNPAFAENQVLGVYSSDLAPVLAQVLANLGTKRSFVIHGCGGLDEISLAGEALVYEVKDNQVKEMIIDPMDYGLDRAPISALAGGDAKRNARMIKNILSGAPGPQRDTIIINAALGLIAGGLVRDLAMGIRLAEQIIDEGYALKKLNLLVEFSQTLV 338          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.415e-28
Identity = 78/191 (40.84%), Postives = 104/191 (54.45%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +    I  F   P D G+ R   ++L+GG    NA  LR VL G+ G              +V+ K  TL EGVAL  +    G ALN L   I VS
Sbjct:  145 EAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVRRQMVGVFSRQWVQPLAQVLKNHGSESAWVVHGSDGLDEITLAGPTFVAALEDGNIRTFEVTPEDAGLERADGDALKGGDAEANAASLRAVLEGKPGAFRDVALLNAAAALIVAGKAKTLKEGVALGAKSLDGGGALNKLKQLIAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.415e-28
Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = -2
Query:  233 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 778
            GIGFM++  +HPAMK V   R++L ++TVFNILGP+ NPA     V+GVY+ +LV  MA AL R  ++RALVVH +GLDE++  G  ++ +VT ++I  ++  P D G+    +E++ GG P  NA  LR +++G+  G               V+   +T   GV  AR+   SG A + LD
Sbjct:  144 GIGFMLAPVFHPAMKAVIGPRQELGMRTVFNILGPLTNPADADAQVLGVYDPDLVPVMAEALARLDVERALVVHGDGLDEIAIHGETVVAEVTDDRIAEYTITPEDMGLETRDIEAISGGSPEENAADLRGIVTGDVTGAKRDIILANAGAAIYVAGVADTHEAGVEQARQAIESGAAADKLD 326          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.415e-28
Identity = 68/189 (35.98%), Postives = 104/189 (55.03%), Query Frame = -2
Query:  221 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 784
            +  I F+ + KYHPAM+FV  VRK++ ++T+FNILGP+ NPA     + GVY+E LV  +A+ L   G KRA+ ++  + +DE+S      + +   ++ + ++  P D+G  RC  E L GG PA NA + R +L G  G               ++    T+ EG+  AREI  SG A   L+ +IE
Sbjct:  143 DINICFLFAQKYHPAMRFVGGVRKEIGIRTLFNILGPLANPAGASMQLFGVYSEELVEPLAHVLHNLGCKRAMTIYGMDSIDEISLSADTKVCEFKGDEFKSYTIKPEDFGFTRCKKEDLAGGEPAVNARIARDILEGAEGPKTDVVLLNAGAAIYLASDGITMKEGIEKAREIIKSGAAKKQLERFIE 331          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.414e-28
Identity = 71/185 (38.38%), Postives = 103/185 (55.68%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            E GIGF+ +   HPAM+ V   R+++ V+TVFNILGP+ NPA +   V+GV+   L   +A  L   G++RA VVH   GLDE+S  GP  + ++ + KI+ + FDPL YG   C+L  LQGG    NA +L+ +L G+ G              +++  VN   E + +ARE    G A   L+
Sbjct:  144 EIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGPLANPANIVGQVLGVFTPELQETLAKVLNNLGVERAFVVHGHGGLDEVSLTGPTRVFELNRGKIDSYLFDPLSYGFSYCSLRDLQGGDAFENARLLQEILDGKPG-PLRDVVLLNAAFGIMAGGVNDFREALVMARESIDKGLAAEKLE 327          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD2_RALSO (Anthranilate phosphoribosyltransferase 2 OS=Ralstonia solanacearum GN=trpD2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.414e-28
Identity = 74/192 (38.54%), Postives = 108/192 (56.25%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            EAGIGFM +  +HPA+K + PVR  L  +T+FN+LGP+LNPA V   ++GVY+   V  +A+AL   G +RALVVH S+GLDE++ +GP  +  + + ++  F   P   G+ R     L+G    +NA  LRRVL G+ G              + +  V    + +ALAR     G AL TL+  +E S+
Sbjct:  145 EAGIGFMFAPTHHPALKQLMPVRVDLATRTIFNLLGPLLNPAGVRHHLIGVYSRAWVEPLAHALGDLGSERALVVHGSDGLDEITTVGPTFVSMLARGRVRSFEITPEMVGLVRANPAELKGADGKWNAVALRRVLEGQPGAYRDIALFNAAGGLIAAGVVENWPDAMALARASVDGGAALATLNRLVEASQ 336          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SYNWW (Anthranilate phosphoribosyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 70/192 (36.46%), Postives = 109/192 (56.77%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            +AGI F+ +  YHP +K V  +R+ L + T+FN +GP+LNP    + V+G+ + NL   +A  LQR G KRALVVH+  G+DE+SP G   + DV +  +E F  DP + GI   +L+++QGG    +A ++ +VL GE G              L + +   + EG+ +A E   +GK++ TL   I  S+
Sbjct:  143 KAGITFLFAPHYHPILKQVGGLRRGLGIATIFNFMGPLLNPCRPSYQVLGISDSNLQEAVAGTLQRLGRKRALVVHAFNGMDEISPEGKTRVFDVGEHGLEVFDIDPEELGIGGFSLDAIQGGDATASARLVIKVLQGEPGPYRDTVILNTAAALLTAGRAKNIQEGMQMAAEAIDAGKSMETLQKMISFSR 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  LQ  G +   VVH S+GLDE++  GP  + ++   +I  F   P D G+PR   ++L+GG    NA  LR VL G  G              +V+ K   L EGVAL  +   SG A   L   I VS
Sbjct:  145 EAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLQNLGSESIWVVHGSDGLDEITLSGPTAVAELKNGEIRTFEIGPEDAGLPRAPADALKGGDAEANAVALRAVLEGMPGPYRDVALLNAAATLIVAGKAKDLKEGVALGAQSIDSGAAEARLKKLIAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCR (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = -2
Query:  248 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKA 784
            EAGI F+ +  +H AMK V P+R++L  +T+FN+LGP+ NPA     VVGV     V  +A AL   G +RA  VH  G+DE++  G   + +     +  F   P   G+PR  L  L GG PA+NA  L R+  GE G              LV+ KV TL EGVALA E   SG+A
Sbjct:  146 EAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGPLTNPAGAKRQVVGVSAPRFVEPIAKALGALGAERAWSVHGSGMDELTTTGETEVAEWRDGVVRLFKITPEAVGLPRAALADLTGGDPAFNAAALTRLFDGETGPYRDIVLLNAAAAFLVADKVETLVEGVALAAEAIDSGRA 324          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCN (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = -2
Query:  248 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKA 784
            EAGI F+ +  +H AMK V P+R++L  +T+FN+LGP+ NPA     VVGV     V  +A AL   G +RA  VH  G+DE++  G   + +     +  F   P   G+PR  L  L GG PA+NA  L R+  GE G              LV+ KV TL EGVALA E   SG+A
Sbjct:  146 EAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGPLTNPAGAKRQVVGVSAPRFVEPIAKALGALGAERAWSVHGSGMDELTTTGETEVAEWRDGVVRLFKITPEAVGLPRAALADLTGGDPAFNAAALTRLFDGETGPYRDIVLLNAAAAFLVADKVETLVEGVALAAEAIDSGRA 324          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESRM8.298e-2935.90Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_NITWN1.415e-2840.84Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_HALMA1.415e-2839.89Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_EUBE21.415e-2835.98Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_CARHZ2.414e-2838.38Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD2_RALSO2.414e-2838.54Anthranilate phosphoribosyltransferase 2 OS=Ralsto... [more]
TRPD_SYNWW3.153e-2836.46Anthranilate phosphoribosyltransferase OS=Syntroph... [more]
TRPD_RHOP23.153e-2839.79Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_CAUCR3.153e-2840.78Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_CAUCN3.153e-2840.78Anthranilate phosphoribosyltransferase OS=Caulobac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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