CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAB (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 63/187 (33.69%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  233 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVL---SGERGXXXXXXXXXXXXXXLVSCKVNT-LAEGVALAREIQLSGKALNTLD 778
            G+GFM +  +H AMK+    R++L ++T+FN+LGP+ NPA V   VVGV+ + L   +A  L+R G +  LVVHS +GLDE S      I ++   ++  +   P D+GI   TL  L+   P  + E++R  L     E G              L +  + T L EG+ LA +   +G A   +D
Sbjct:  148 GVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVLVVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLELIRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMD 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA8 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 63/187 (33.69%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  233 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVL---SGERGXXXXXXXXXXXXXXLVSCKVNT-LAEGVALAREIQLSGKALNTLD 778
            G+GFM +  +H AMK+    R++L ++T+FN+LGP+ NPA V   VVGV+ + L   +A  L+R G +  LVVHS +GLDE S      I ++   ++  +   P D+GI   TL  L+   P  + E++R  L     E G              L +  + T L EG+ LA +   +G A   +D
Sbjct:  148 GVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVLVVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLELIRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMD 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 63/187 (33.69%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  233 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVL---SGERGXXXXXXXXXXXXXXLVSCKVNT-LAEGVALAREIQLSGKALNTLD 778
            G+GFM +  +H AMK+    R++L ++T+FN+LGP+ NPA V   VVGV+ + L   +A  L+R G +  LVVHS +GLDE S      I ++   ++  +   P D+GI   TL  L+   P  + E++R  L     E G              L +  + T L EG+ LA +   +G A   +D
Sbjct:  148 GVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVLVVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLELIRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMD 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPL (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Lens) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = -2
Query:  365 IGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 775
            + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  147 LAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPH (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = -2
Query:  365 IGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 775
            + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  147 LAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPC (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Corby) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = -2
Query:  365 IGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 775
            + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  147 LAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPA (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Paris) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = -2
Query:  365 IGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 775
            + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  147 LAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAD (Anthranilate phosphoribosyltransferase OS=Acinetobacter sp. (strain ADP1) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19
Identity = 58/198 (29.29%), Postives = 103/198 (52.02%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLA----EGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E G+GF+ +  +H AMK+    R++L ++++FN+LGP+ NPA V   V+GV+++ L   +A  +++ G +  +VVHS +GLDE+S      I ++   ++  +  +P D  IP  TL  L       + ++++  L  ++                    V+ LA    +GVALA +I   G+AL  + +  E +K L
Sbjct:  146 EMGVGFLFAPNHHKAMKYAVGPRRELGIRSIFNLLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLASQTYIAELKNGEVTEWVLNPEDVNIPSQTLSGLIVEDSNASLKLIKDALGRKKSDIGEKAANMIALNAGAGIYVSGLATSYKQGVALAHDIIYGGQALEKMSILSEFTKAL 343          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_JANMA (Anthranilate phosphoribosyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19
Identity = 57/194 (29.38%), Postives = 98/194 (50.52%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            + GIGFM +  +H AMK   PVRK+L V+T+FNILGP+ NPA  P  ++GV++ +LV      LQR G + A+VV   + +DE+S     ++ ++   +I  +   P D+G+      +L+      +   +   L                     +   +++A+G+A AR    SG A   L+ +++V++ L
Sbjct:  148 QTGIGFMFAPNHHAAMKHAAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHPDLVGIQVRVLQRLGAQHAIVVWGRDNMDEVSLGAATMVGELVNGEIREYEIHPEDFGLQMIASRNLKVANSVESKAKIFEALDNVDSPARDIVALNAGTALYAAGVASSIADGLAKARAAIASGAARAKLEQFVQVTQAL 341          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_DESDG (Anthranilate phosphoribosyltransferase OS=Desulfovibrio desulfuricans (strain G20) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.564e-19
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = -2
Query:  371 FMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 769
            F+ +  YHPA + V PVR+ L ++T+FN+LGP+LNPA     ++GV    ++  MA+AL   G++RA VVH + G DE++ +GP  ++ V     E    +P D+G   CT   L+        EV+R +L+GE
Sbjct:  150 FLFAPFYHPAFRHVMPVRRDLGIRTLFNVLGPLLNPARPTRMLLGVAKPAMLHTMADALLLTGVRRAAVVHGAGGYDELTTMGPARVVMVRDGATEEMEINPADHGFAPCTPAQLEVHDRQEALEVMRLLLAGE 283          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSEAB2.049e-1933.69Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA82.049e-1933.69Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA72.049e-1933.69Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_LEGPL2.049e-1934.06Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPH2.049e-1934.06Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPC2.049e-1934.06Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPA2.049e-1934.06Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_ACIAD2.675e-1929.29Anthranilate phosphoribosyltransferase OS=Acinetob... [more]
TRPD_JANMA3.494e-1929.38Anthranilate phosphoribosyltransferase OS=Janthino... [more]
TRPD_DESDG4.564e-1938.06Anthranilate phosphoribosyltransferase OS=Desulfov... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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