CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:628..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28
Identity = 70/194 (36.08%), Postives = 112/194 (57.73%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E G GFM +  +HPAMK V   R+++ V+++FN++GP+ NPA V   ++GV+++  V K A AL+  G+K+A VVH E G+DE+S  G   + +V++E I  F+F P + G+ R +L  ++   P  + +V   VL GE G              LVS +   + E   +A+E   SGKAL  L+ ++E+S  +
Sbjct:  147 EVGFGFMFAPLFHPAMKRVVSPRREVGVRSIFNLIGPLTNPAGVKRYLLGVFSKEYVDKFAKALKNLGVKKAFVVHGEGGIDEVSVEGETYVTEVSEEGIRSFTFSPEELGVKRKSLSEVRVNSPEESVKVALSVLRGEEGTPRDMVLLNASFGILVSERAGDIKEAFEMAKESIDSGKALEVLEKYVELSNKI 340          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.118e-28
Identity = 69/185 (37.30%), Postives = 103/185 (55.68%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            E GIGF+ +   H AMK     R+++ ++T+FNILGP+ NPA     V+GVY E LV KMA  L   G KR  VVH  +G+DE++  G     +V+ E +  F+  P ++G  RC++++L+GG    NA ++R VL GE G              L + +  T+A G+ LA +   SG AL  ++
Sbjct:  158 EIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGPLTNPANADCQVMGVYREELVAKMAGVLHHLGCKRGFVVHGRDGMDEITLTGETAAAEVSPEGVRLFTITPEEFGFSRCSMQALKGGDAVANAAIVRAVLGGEPGPRREIVLLNAGFALLAAGRCATVAAGIDLAAQAIDSGAALMQIE 342          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.378e-28
Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGVY    V  +A  L+  G +   VVH EGLDE++  G   +  +    I  F   P D+G+ R +L++L+GG  A+NA  L+ VL G                 +++ +   L+EG+ALAR+   SG A   L   I VS
Sbjct:  145 EAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGVRQQLVGVYAPQWVDPLAEVLRDLGSESVWVVHGEGLDEITTTGVTKVAALKDGTITNFELTPADFGLERVSLDALKGGDGAHNAAALQAVLDGAENAYRDISLANAAASLMIAGRAGDLSEGMALARQSLSSGGAKVALQRLITVS 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.378e-28
Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G K A VVH S+GLDE++  GP  +  +   +I  F   P   G+  C  + L+GG  A NA  L+ VL G                 +V+ +  TLAEGVA+ R+   SG A   L   I VS
Sbjct:  145 EAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKHQMVGVFSRQWVEPLAQVLKNLGSKAAWVVHGSDGLDEITLTGPTFVAALEHGQIRTFEVTPEQAGLGLCGSDGLKGGDAAANAVALQSVLDGMPSPYRDVALLNAAAALVVAGRAKTLAEGVAIGRDALDSGAAAARLKHLIAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 73/194 (37.63%), Postives = 110/194 (56.70%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            EAGIGFM +  +HPAMK V P R ++  +T+FN+LGP+ NPA V   +VGV+ ++ ++ +A  L+  G ++A VVH S+GLDE++  G   I  + + +I  F+  P D G+ R   E L+GG   +NA+ LR VL G  G              +V+ +   L EGV +AR    +G A   L+  + VS+ L
Sbjct:  145 EAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGPLSNPAGVTRQMVGVFAKSWIVPLAEVLRTLGSQKAFVVHGSDGLDEITISGGTDIAVLDEGRIHTFTIMPEDVGLKRHPAEDLKGGDAVHNAKALRTVLDGAEGAYRDVSLFNAAAALVVAGRAKDLKEGVEMARVSLDTGSARARLEHLVAVSEKL 338          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.174e-28
Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = -2
Query:  212 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSC-KVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 784
            +AGIGFM + K+HPAM+FV PVR+++ ++TVFNILGP+ NPA     V+GV +  L  KMA AL   G + ALV+H   GLDE++  GP L++DV       R+     D G+     E+L+GG  + N  ++R +LSGE                LV+  +   L +G+  AR    SG AL  L+  I VS+
Sbjct:  144 QAGIGFMFAQKFHPAMRFVGPVRREIGIRTVFNILGPLSNPAHARHQVLGVADPALAEKMARALHLLGTQHALVIHGHGGLDELTLSGPNLVIDVRAGHTPRRYEVTAADLGLAPAPREALRGGDVSVNVAIVRGILSGEDQSARRDVALLNAAAALVAADRAADLRDGLHQARHSLESGAALARLERLITVSR 337          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_SINMW (Anthranilate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27
Identity = 71/190 (37.37%), Postives = 102/190 (53.68%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGVY    V  +A  L+  G +   VVH EGLDE++  G   +  +    I  F   P D+G+ R TL++L+GG  A+NA  L+ VL G                 +++ +   L EG+ LAR+   SG A   L   I VS
Sbjct:  145 EAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGVRQQLVGVYAPQWVDPLAEVLRDLGSESVWVVHGEGLDEITTTGVTKVAALKDGTITNFELTPADFGLERVTLDALKGGDGAHNAAALQAVLDGAENAYRDISLANAAASLMIAGRAKDLMEGMDLARKSLSSGAAKVALQRLITVS 334          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27
Identity = 75/191 (39.27%), Postives = 102/191 (53.40%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   KI  F   P D G+PR   + L+GG    NA  L+ VL G+                +V  + NTL +GVA   +   SG A   L   I VS
Sbjct:  145 EAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITISGPTFVAALADGKITTFEITPEDAGLPRAGADVLKGGDAEANAVALQGVLDGKPSAYRDVALLNAAAALIVGGRANTLKDGVAQGAQALDSGAAAAKLKQLIAVS 335          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_NITEC (Anthranilate phosphoribosyltransferase OS=Nitrosomonas eutropha (strain C91) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27
Identity = 73/194 (37.63%), Postives = 108/194 (55.67%), Query Frame = -2
Query:  206 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 784
            E GIGFM +  +H AMK   PVR++L V+T+FNILGP+ NPA     ++GV+NE+L   +A AL R G + A++VH S+GLDE++  GP  I ++ + +I  ++  P D+G+ R  +ESLQ         +L  VL    G               V+ K ++ AEGV +AR+   SG A   +   I+ S  L
Sbjct:  146 EVGIGFMFAPNFHHAMKHAAPVRRELGVRTLFNILGPLTNPAGAKNQLLGVFNEDLTGILAQALLRLGSQHAMIVHGSDGLDEITISGPTKIAELKEGEIREYTVQPEDFGLERTAIESLQVNSTDDARVMLLSVLDNHPGPARDIVLLNAGAAIYVAGKADSWAEGVEIARDKLASGAAKEKMLALIKFSNQL 339          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.044e-27
Identity = 71/188 (37.77%), Postives = 109/188 (57.98%), Query Frame = -2
Query:  233 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQE---KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLD 784
            EAGIGFM + ++HPA++   PVR++L  +TVFN+LGP+ NPA V + ++GV    LV  +A  L    ++ ALVVHS +GLDE+S   P  + +V +    ++ R++ +P   G+ R   ++L+GG    NA ++R VL G RG              + +    +LAEG+ LAR    SG AL+ L+
Sbjct:  145 EAGIGFMFAQRFHPALRHAAPVRRELGFRTVFNVLGPLANPARVRYQLLGVAMPELVETVARVLALLDVEHALVVHSADGLDEISLGAPTTVYEVRRNGTVEVRRWTLEPESLGLERVPSDALRGGTAEENARIVRAVLEGARGPARDVVLLNAAAALVAADAAQSLAEGLELARHAIDSGAALDRLE 332          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_AQUAE3.153e-2836.08Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_GEOLS4.118e-2837.30Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RHIME5.378e-2837.37Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_BRASB5.378e-2839.79Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_XANP27.024e-2837.63Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_ROSS19.174e-2839.69Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_SINMW1.565e-2737.37Anthranilate phosphoribosyltransferase OS=Sinorhiz... [more]
TRPD_RHOPB1.565e-2739.27Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_NITEC1.565e-2737.63Anthranilate phosphoribosyltransferase OS=Nitrosom... [more]
TRPD_THERP2.044e-2737.77Anthranilate phosphoribosyltransferase OS=Thermomi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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