CF835935

Overview
NameCF835935
Unique NameCF835935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:628..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPY (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPS (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPP (Anthranilate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPN (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPE (Anthranilate phosphoribosyltransferase OS=Yersinia pestis GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  144 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 281          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPB (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERPA (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  143 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_YERP3 (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 55/138 (39.86%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  371 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 784
            + G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  144 DLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 281          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFA (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 66/190 (34.74%), Postives = 109/190 (57.37%), Query Frame = -2
Query:  212 GIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVV-HSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 778
            G+GFM +  +HP M+ V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV   A+ L + G +RALVV   +G+DE+S     L+ ++   ++  +   P DYG+    + +LQ   PA + E+L  VL+G+ G               V+     +  GVALARE+   G+A + LD ++  ++
Sbjct:  150 GVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGPLTNPADAPNILMGVFDPDLVGIQAHVLHKLGAERALVVCGRDGMDELSLGTTTLVGELRGGRVREYEVSPEDYGMAVSPISNLQVESPAESREMLLDVLAGQPGPALDVVALNAGAALYVAGVAQDIGHGVALAREVLFDGRARDILDRYVAFTR 339          
BLAST of CF835935 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26
Identity = 74/191 (38.74%), Postives = 101/191 (52.88%), Query Frame = -2
Query:  215 EAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 784
            EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G +   VVH S+GLDE++  GP  +  +   +I  F   P D G+PR   ESL+GG    NA  L+ VL G+                +V+ +   L E VAL  +   SG A   L   I VS
Sbjct:  145 EAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNMLGPLSNPAGVKRQMVGVFSRQWVQPLAQVLKNLGSEAVWVVHGSDGLDEITISGPTFVAALKDGEITTFEITPEDAGLPRAPAESLKGGDAEANAAALKGVLQGKPSPYRDVALLNAGATLIVAGRAGDLKEAVALGAQSIDSGAAAARLAKLIAVS 335          
The following BLAST results are available for this feature:
BLAST of CF835935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_YERPY1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPS1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPP1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPN1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPE1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPB1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPA1.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERP31.730e-2639.86Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_XYLFA1.730e-2634.74Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_RHOP51.730e-2638.74Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835935 ID=CF835935; Name=CF835935; organism=Citrus sinensis; type=EST; length=785bp
GTATTCAACATAACATAATACATTCCTTAAGCCAATACTTTTGATATACT
ACAATAAACAATATTAATTTTAGGGACCTTCTAATTTCTTCTAATAGTTG
ATCGACAAGACGTGCATAAGCAAGCCAACTTTTGACCTACCTGTTATTCA
TGGTACTGCAATGAAGTCTTTCTTAGGCTTCAAAACTCCATTACTCATGC
ACAAGCAAATGCTTTGAGACTTCTATCCATAAATCCAGTGTATTAAGAGC
TTTCCCTGATAATTGAATTTCACGTGCCAGGGCTACACCCTCAGCCAAGG
TGTTCACTTTGCAACTGACCAACAGCGCTGCTGCAGCATTTAGGATTAAT
GCATCAGCTATTGCCCCTCTTTCTCCAGACAGTACACGCCTTAAGACCTC
TGCATTATATGCTGGGCCTCCACCTTGCAAGCTTTCTAAAGTGCAGCGCG
GAATGCCGTAGTCCAATGGATCAAATGAGAATCTCTCAATTTTTTCTTGG
GTGACATCAAGGATCAGACCAGGTCCAAGGGGACTCATCTCATCCAAACC
CTCTGAGTGAACAACCAATGCTCTTTTCAGGCCAAATCGTTGCAATGCAT
TGGCCATTTTGAGTACCAAGTTTTCATTGTAAACACCAACCACAGCGAAT
GGCACACATGCAGGATTCAACATAGGACCCAATATATTGAATACAGTTTT
TACTTTGAGCTTTTTCCTCACTGGCCTGACAAACTTCATTGCAGGGTGAT
ACTTTGTCGACATCATGAAACCAATTCCTGCCTCA
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