CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METMP (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25
Identity = 71/208 (34.13%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF-GLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            A+V +ALG  I   P+  ++ +D+    F+ + KYHPA+K + PVR +LKVKT+FNILGP+ NPA   + ++GV +  L   +A AL +  G+K+ALVV+  GLDE++P G   I +    K + +   P D+G+    +   +   P  +A+ L  V SG+                  S   +   +GV +A+E   SGK L  L+
Sbjct:  112 ANVYKALGCKIPETPDDAKKSMDKTNFAFLFAQKYHPALKKIMPVRNELKVKTIFNILGPLANPANPKYQILGVNSSELCDNVAIALSKVGGIKKALVVYGNGLDELTPNGTSKITEY-DGKFDTYEVTPKDFGLDYSKIIPCE--SPDESAKRLIDVFSGKINEDRNFILMNAAAALYTSEIASDFLDGVEIAKEAIESGKVLKKLE 316          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_JANMA (Anthranilate phosphoribosyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25
Identity = 70/222 (31.53%), Postives = 115/222 (51.80%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            S+   ADVLE+LG  I+L PE V   + + GIGFM +  +H AMK   PVRK+L V+T+FNILGP+ NPA  P  ++GV++ +LV      LQR G + A+VV   + +DE+S     ++ ++   +I  +   P D+G+      +L+      +   +   L                     +   +++A+G+A AR    SG A   L+ +++V++ L
Sbjct:  120 SSSGSADVLESLGANINLKPELVAESIAQTGIGFMFAPNHHAAMKHAAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHPDLVGIQVRVLQRLGAQHAIVVWGRDNMDEVSLGAATMVGELVNGEIREYEIHPEDFGLQMIASRNLKVANSVESKAKIFEALDNVDSPARDIVALNAGTALYAAGVASSIADGLAKARAAIASGAARAKLEQFVQVTQAL 341          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_NEIG1 (Anthranilate phosphoribosyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGI-PRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 623
            S+   ADV+E +G  ++L PE + + + + GIGFM +  +H AM+ V PVR+ L  +++FNILGP+ NPA  P  ++GV++ +L   ++  LQ+ G K  LVV  E GLDE++  G   + ++   KI  +   P D+GI  R  L+ ++      +   +  VL G+ G                     +L++G++ ARE   SG+A
Sbjct:  119 SSSGAADVMEQMGANLNLTPEQIAQSIRQTGIGFMFAPNHHSAMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHVLVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESLLKMNEVLDGKEGAARDIVLLNTAAALYAGNIAASLSDGISAAREGIDSGRA 327          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MYCUA (Anthranilate phosphoribosyltransferase OS=Mycobacterium ulcerans (strain Agy99) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 77/224 (34.38%), Postives = 109/224 (48.66%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAE-------GVALAREIQLSGKALNTLDLWIEVSKHL 665
            AD LE+LGV IDL P+ V R ++E GIGF  + ++HP+ +    VR+++ V TVFN+LGP+ NPA     ++G    +L   MA      G    LVVH  +GLDE++      I  V    +++ +FDP D+G  R  L  L GG P  NA   R VL G  G                   +++ AE       G+  A     SG A   L  W+  S+H+
Sbjct:  145 ADTLESLGVRIDLGPDQVARSLNENGIGFCFAPQFHPSYRQASVVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEIMAGVFATRG-SSVLVVHGDDGLDELTTTTTSTIWRVQAGTVDKLTFDPGDFGFARAELSQLLGGDPQANAAEARAVLGGAAGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWQDGLQRAAVAIDSGAAEQLLARWVRFSQHV 367          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPL (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Lens) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 55/164 (33.54%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            AD+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  121 ADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPH (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 55/164 (33.54%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            AD+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  121 ADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPC (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Corby) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 55/164 (33.54%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            AD+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  121 ADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPA (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Paris) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 55/164 (33.54%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            AD+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP++NPA V   VVGV++ N +  +A  L   G +R+LV+ S +GLDE+S      +++      +++   P DYG+   +L+++    P  +  +++ VLSG+ G
Sbjct:  121 ADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISSQDGLDEISIAAKSEVVEYRDGNFKQWFISPEDYGLKHSSLDAIIVDSPEQSLHLIQSVLSGDSG 284          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ANATD (Anthranilate phosphoribosyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25
Identity = 69/203 (33.99%), Postives = 112/203 (55.17%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 623
            AD+LE LG+ I  + + + + +++    F+ +  YHPAMK V  +R+ L ++TVFNILGP+LNP  + + VVG ++ +   K+A+ L R   K+A V+HS +GLDE+S      +L++  + I+ +  DP DYGI +    S++G  P  NA +L  VL GE+                +      + EG+ L+ +   S KA
Sbjct:  121 ADILEKLGIDIQAEEDKILKGLEKLNFAFLFAPLYHPAMKKVANLRRSLGIRTVFNILGPLLNPVPLKYQVVGTFSFDAQDKVASVL-RGNRKKAAVIHSLDGLDEISISQKTRVLEIQDKNIKEYYIDPKDYGI-KFDTNSIRGFSPEENARILISVLEGEKSPYFWAVVLNCGFALYICEVAKDVEEGIKLSSKAIESKKA 321          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SACD2 (Anthranilate phosphoribosyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25
Identity = 77/226 (34.07%), Postives = 112/226 (49.56%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG-------XXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S+   ADVLEA GV + +  + V R ++  G+GFM +  +H AMK     RK+L ++T+FN+LGPM NPA V   V+GV+ + L   MA  L R G +  LVVHSE GLDE+S   P  + +  +  +  ++  P D GI    ++SL+G G A   E L  +     G                      VS    +  +GVA+A +   +G A   L   +E S
Sbjct:  117 SSTGSADVLEAAGVNLQMPADQVARAIETIGVGFMFAPAHHSAMKHAIGPRKELGLRTIFNMLGPMTNPAGVKNQVIGVFTKALCRPMAEVLGRLGSEHVLVVHSEDGLDELSIAAPSHVAEYHKGNVTEYTLSPADVGI---EMQSLEGLGVATAEESLALINGAFAGSDEPAAQKAAAIIALNAGAAIYVSGLATSFKDGVAMAEDALATGAAREKLKELVEFS 339          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METMP3.869e-2534.13Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_JANMA3.869e-2531.53Anthranilate phosphoribosyltransferase OS=Janthino... [more]
TRPD_NEIG15.053e-2532.54Anthranilate phosphoribosyltransferase OS=Neisseri... [more]
TRPD_MYCUA5.053e-2534.38Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_LEGPL5.053e-2533.54Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPH5.053e-2533.54Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPC5.053e-2533.54Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPA5.053e-2533.54Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_ANATD5.053e-2533.99Anthranilate phosphoribosyltransferase OS=Anaeroce... [more]
TRPD_SACD26.600e-2534.07Anthranilate phosphoribosyltransferase OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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