CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MYCS2 (Anthranilate phosphoribosyltransferase OS=Mycobacterium smegmatis GN=trpD PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.470e-24
Identity = 68/164 (41.46%), Postives = 90/164 (54.88%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            AD LEALGV IDL P+ V R V E GIGF  + ++HP+ K    VR+++ V TVFN+LGP+ NPA     ++G    +L   MA      G    LVVH  +GLDE++      I  V    +ER +FDP  +G  R  +  L GG  + NA   R VL G +G
Sbjct:  142 ADTLEALGVRIDLGPDDVARSVREVGIGFAFAPQFHPSYKHASIVRREIGVPTVFNLLGPLTNPAGPRAGLIGCAWADLAEVMAGVFAARG-SSVLVVHGDDGLDELTTTTTSTIWRVQGGTMERLTFDPAAFGFKRAEISELVGGDASENAAEARAVLGGAKG 304          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BUCAT (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.920e-24
Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 500
            +D+LE   + ++  PE  R+ +D+  I F+ + KYH   K+   VR  LK KT+FN LGP LNPA  P +V+GVYN+NL+    N L+    KRA+V+HS+  DE++  G   + ++  +KI  +   P  +G+     + L+      N  +++ ++ G+
Sbjct:  120 SDILEKFNINLNASPEKSRKTLDQLNICFLFAPKYHDGFKYSNNVRTDLKTKTIFNFLGPFLNPATPPLSVIGVYNKNLINIAVNILKNLQYKRAIVLHSDNTDEVTLHGTTYVSELLNKKIISYQLQPESFGLKMHPKKILKINSLEENYHIIKEIMKGK 280          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MYCLE (Anthranilate phosphoribosyltransferase OS=Mycobacterium leprae GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24
Identity = 78/226 (34.51%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA--LVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAE-------GVALAREIQLSGKALNTLDLWIEVSKHL 665
            AD LEALGV IDL PE V   + E GIGF  +  + P+ ++   VR ++ V TVFNILGP+ NPA     ++G    NL   MA     F  +R+  LVVH  +GLDE++      I  V    +++ +FDP+++G  R  L+ L GG    NA  +R VL+G +G                   +++ AE       G+A A     SG A   L  W+  S+ +
Sbjct:  144 ADTLEALGVRIDLGPEQVANSLAEIGIGFCFAPLFQPSYRYASAVRHEIGVPTVFNILGPLTNPAWPRAGLIGCAFGNLAEVMAGV---FAARRSSVLVVHGDDGLDELTTTTTSTIWRVQAGTVDKLTFDPVEFGFARAHLDDLLGGDAQTNAAKVRAVLAGAKGPVRDAVVLNAAGAIVAYAGLSSHAEWSPAWDDGLARASAAIDSGAAEQLLARWVRFSQQV 366          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MYCLB (Anthranilate phosphoribosyltransferase OS=Mycobacterium leprae (strain Br4923) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24
Identity = 78/226 (34.51%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA--LVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAE-------GVALAREIQLSGKALNTLDLWIEVSKHL 665
            AD LEALGV IDL PE V   + E GIGF  +  + P+ ++   VR ++ V TVFNILGP+ NPA     ++G    NL   MA     F  +R+  LVVH  +GLDE++      I  V    +++ +FDP+++G  R  L+ L GG    NA  +R VL+G +G                   +++ AE       G+A A     SG A   L  W+  S+ +
Sbjct:  144 ADTLEALGVRIDLGPEQVANSLAEIGIGFCFAPLFQPSYRYASAVRHEIGVPTVFNILGPLTNPAWPRAGLIGCAFGNLAEVMAGV---FAARRSSVLVVHGDDGLDELTTTTTSTIWRVQAGTVDKLTFDPVEFGFARAHLDDLLGGDAQTNAAKVRAVLAGAKGPVRDAVVLNAAGAIVAYAGLSSHAEWSPAWDDGLARASAAIDSGAAEQLLARWVRFSQQV 366          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CORGL (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum GN=trpD PE=3 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 62/161 (38.51%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQE-KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 497
            ADVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP+L+PA     ++GV N N    +A   +  G  RALVVH  G DE++  G  L+ ++ ++  IE ++ +P D G+ R TLE L GG    NAE +R   +G
Sbjct:  125 ADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGPLLSPARPERQIMGVANANHGQLIAEVFRELGRTRALVVHGAGTDEIAVHGTTLVWELKEDGTIEHYTIEPEDLGLGRYTLEDLVGGLGTENAEAMRATFAG 285          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CORGB (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum (strain R) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 62/161 (38.51%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQE-KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 497
            ADVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP+L+PA     ++GV N N    +A   +  G  RALVVH  G DE++  G  L+ ++ ++  IE ++ +P D G+ R TLE L GG    NAE +R   +G
Sbjct:  125 ADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGPLLSPARPERQIMGVANANHGQLIAEVFRELGRTRALVVHGAGTDEIAVHGTTLVWELKEDGTIEHYTIEPEDLGLGRYTLEDLVGGLGTENAEAMRATFAG 285          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BORPE (Anthranilate phosphoribosyltransferase OS=Bordetella pertussis GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 70/213 (32.86%), Postives = 106/213 (49.77%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            S+   ADVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  120 SSSGSADVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BORPA (Anthranilate phosphoribosyltransferase OS=Bordetella parapertussis GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 70/213 (32.86%), Postives = 106/213 (49.77%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            S+   ADVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  120 SSSGSADVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BORBR (Anthranilate phosphoribosyltransferase OS=Bordetella bronchiseptica GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 70/213 (32.86%), Postives = 106/213 (49.77%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            S+   ADVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  120 SSSGSADVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD2_ANASP (Anthranilate phosphoribosyltransferase 2 OS=Anabaena sp. (strain PCC 7120) GN=trpD2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 70/208 (33.65%), Postives = 117/208 (56.25%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILD---VTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTL--AEGVALAREIQLSGKA 623
            ADVLEALGV +   PE V+  + E GI F+ +  +HPA+K V  +R+ L+++TVFN+LGP++NP      VVG++   L+  +A AL   G ++A+V+H  G + +   G G + D   ++  +++  + +P + G+    + +L+GG    NAE+L+ VL G+                  V+  V  L  A+GV++A+EI  +G A
Sbjct:  144 ADVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLH--GRERLDEAGLGDLTDLAVLSDGELQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTA 349          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MYCS21.470e-2441.46Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_BUCAT1.920e-2433.54Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_MYCLE2.508e-2434.51Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MYCLB2.508e-2434.51Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_CORGL3.275e-2438.51Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CORGB3.275e-2438.51Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_BORPE3.275e-2432.86Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_BORPA3.275e-2432.86Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_BORBR3.275e-2432.86Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD2_ANASP3.275e-2433.65Anthranilate phosphoribosyltransferase 2 OS=Anabae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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