CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD1_ANASP (Anthranilate phosphoribosyltransferase 1 OS=Anabaena sp. (strain PCC 7120) GN=trpD1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 70/216 (32.41%), Postives = 114/216 (52.78%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCK--------VNTLAEGVALAREIQLSGKALNTLD 638
            ADVLEALG+ ++ + + V+  V E GI F+ +  +HPA+K V  +RK LKV+T+FN+LGP++NP      ++GV +  L+ ++A AL   G ++A+ +H  E LDE        +  +   K+   + +P + G+     E L+GG  A NAE+L+ +L G +G               +           V    +G+A+ARE+  SG A   L+
Sbjct:  143 ADVLEALGINLNANADKVQAAVSEVGITFLFAPGWHPALKTVATLRKTLKVRTIFNLLGPLVNPLRPTGQIIGVNDPLLIEEIALALSHLGCRKAIALHGRERLDEAGLADVTDLAILQDGKVSCLALNPQELGLNHAPTEVLRGGDVAENAEILKAILQG-KGTQAQQDVVALNTALALQVGEAITTTDIVEGCVKGIAIAREVLQSGAAWTKLE 357          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYNS3 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain CC9311) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 500
            ADVLE LG+ +    E V   +  +G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV    L+  MA ALQ+ GL RA+VVH + GLDE S  GP  +  +    +        D+G+    LE+L+GG    N ++L  VL GE
Sbjct:  128 ADVLEGLGLHLKAPLESVLGALPASGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLTPEAQVLGVAKAELLDPMAEALQQLGLTRAVVVHGAGGLDEASLEGPNEVRILENGNVRSDQLSASDFGLTLAPLEALRGGDLVTNQQILEAVLKGE 289          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYNPX (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain WH8102) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 497
            ADVLE LG+ +    + V   +  AG+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV  ++L+  MA ALQR GL+RA+VVH + GLDE S  GP  +  +    I      P + G+    LE+L+GG    N  +L++VL G
Sbjct:  134 ADVLEGLGLNLKAPLQLVVDAIPAAGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLKPQAQVLGVAKKDLLDPMAGALQRLGLERAVVVHGAGGLDEASLAGPNDLRFIEAGAIRSLQLSPDELGLATADLETLKGGDLDCNQTILQQVLQG 294          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PROMM (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 65/161 (40.37%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 497
            ADVLE LG+ +      V   + E G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV    L+  MA ALQR GL+RA+VVH + GLDE S  G   +  +    + + S D  + G+ R  L++LQGG  A N  +L  VL G
Sbjct:  131 ADVLEGLGLQLKAPLVSVVEALVEVGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLQPNAQVLGVAKAELLNPMAEALQRLGLQRAVVVHGAGGLDEASLEGANAMRLLENGHLRQASIDSAELGLTRAPLQALQGGDLATNQAILSAVLQG 291          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ERYLH (Anthranilate phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD LEALG+ ++       + + E GI F+ +  +HPAM  ++P+R++L  +T+FN++GP+ NPA V   ++G+     V   A A  + G +R  +V   EGLDE+S  G   + DV   + E         G+P   +E+++GG  A+NA  L+ +L G  G                +  V     G A+A E   SGKA   L  WIE++
Sbjct:  116 ADTLEALGLDMEAVGRTAEKTLAEIGICFLFAKNHHPAMGRIQPIRQRLGKRTIFNLMGPLSNPAGVKRQLIGIARPGYVPIYAEAKAKLGTERTYIVSGDEGLDELSLAGGNELADVCGNEFEMRRVYAEMIGLPHAPVEAIRGGDAAHNAMALKALLEGTPGPYRDAVVFNAAATLMAAGAVEDWEVGAAMAVESLDSGKANELLGKWIEMA 329          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CLAMS (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 60/168 (35.71%), Postives = 94/168 (55.95%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            SA   +DVL ALG+ + + PE V   + E GI +  +  +HP  +     R++L + T+FN+LGP+ NPA    + VGV + + V  M    +  G    +    +G+D+++  G   I +V++  +     DPL+ GIPR  +E+L G G   NAEV+RRVL+GE G
Sbjct:  121 SASGASDVLTALGIDLTIAPERVAAVLRETGITYAHAALFHPGFRHAAATRRELGISTLFNVLGPLCNPARPEASAVGVADLSRVPLMVGVFRTRGATALVYRGDDGIDKLTTTGHSHIWEVSRGAVTEHDLDPLELGIPRAPIEALLGEGVEENAEVIRRVLAGEPG 288          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHOBA (Anthranilate phosphoribosyltransferase OS=Rhodopirellula baltica GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.587e-24
Identity = 66/196 (33.67%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALARE 602
            ADVLE LGV I+ +P+ V R +++ GI F  + K HPAM+ V  VR+KL V T+FN+LGP+ NPA     ++G        K+A AL     +R+ V+H+ +G DE+S  G    ++V     +  ++ P D+G+      +L    P  +AE++R +  G  G               +  +V++L EGV +A E
Sbjct:  131 ADVLECLGVKIESEPDQVSRRLNDIGICFCFAAKLHPAMRHVVSVRRKLAVPTLFNLLGPLCNPAGATHQLLGTAAPETQQKIAAALAELDTQRSYVLHAQDGQDEVSLDGETSCIEVASGTQQNHTWTPADFGLTPVHQNALAAADPPESAEIIRNLFGGSPGSHRDTVLAGCAAALRLVGRVSSLTEGVEIAAE 326          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CORJK (Anthranilate phosphoribosyltransferase OS=Corynebacterium jeikeium (strain K411) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.587e-24
Identity = 75/224 (33.48%), Postives = 110/224 (49.11%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDV-----TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCK-------VNTLAEGVALAREIQLSGKALNTLD 638
            S C  AD+LEALG+ I+  PE +R+   + G  FM +  YHPAM+F  PVR +L   T+FN+LGPM NPA   F ++G   +  +  M  A  R G +  +V   +G+DE+S   P  ++ V     T E++     +P + G+      SL GG   YNA+V  R++ GE                  + +         TL E V +ARE   SG AL  ++
Sbjct:  141 SKCGGADMLEALGLDIERSPEDIRQDAHDTGFAFMFAKTYHPAMRFAGPVRSQLGAPTIFNLLGPMTNPAYPKFGLIGCAFKEFMPIMGGAFARQGSRVLVVRGMDGMDEISVCTPTEVVTVDAAGRTGEEV----INPRNVGLDFYEDGSLVGGDAEYNADVAVRLMKGEISGAIKDAVLINAAGALTAVRGWEENGFQETLREQVQIAREALESGAALKQME 360          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ANAVT (Anthranilate phosphoribosyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.587e-24
Identity = 72/220 (32.73%), Postives = 120/220 (54.55%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILD---VTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTL--AEGVALAREIQLSGKALNTLDLWIEVSK 659
            ADVLEALGV +    E V+  + E GI F+ +  +HPA+K V  +R+ L+++TVFN+LGP++NP      VVG++   L+  +A AL   G ++A+V+H  G + +   G G + D   ++  K++  + +P + G+    + +L+GG    NAE+L+ VL G+                  V+  V  L  A+GV++A+EI  +G A   L+  +   K
Sbjct:  144 ADVLEALGVNLGASSEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLH--GRERLDEAGLGDLTDLAVLSDGKLQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGQGTQAQQDAVALNAALALQVAGAVPLLDHAKGVSVAKEILQTGTAWAKLEQLVHFLK 361          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYNFM (Anthranilate phosphoribosyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24
Identity = 70/213 (32.86%), Postives = 101/213 (47.42%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            S C  AD+LEALG+ +D   E V   +   GIGF+ +  +H AM+     RK++ V+++FN+LGP+ NPA     V+GVY   L    A AL+  G +RA VVH  +GLDE+S   P  + ++    +  +   P      +   E L GG P  NA++ R VL G  G                +         V  A E    GKA+  L+
Sbjct:  116 SQCGSADLLEALGMRLDAPAEVVEEAIGRIGIGFLFAPLFHGAMRHAARARKEVGVRSIFNMLGPLTNPAGANCQVLGVYAPQLTEMFAQALRLLGARRAFVVHGQDGLDEISVCAPTRVSELDGGLVRTYDLQPELLLGRKADPEDLAGGDPGVNAKITRDVLGGAIGPRRDVVVLNAAAALIAAGAAEGFPSAVRNAEESIDGGKAIEKLE 328          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD1_ANASP3.275e-2432.41Anthranilate phosphoribosyltransferase 1 OS=Anabae... [more]
TRPD_SYNS34.278e-2438.89Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SYNPX4.278e-2439.75Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_PROMM4.278e-2440.37Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_ERYLH4.278e-2432.24Anthranilate phosphoribosyltransferase OS=Erythrob... [more]
TRPD_CLAMS4.278e-2435.71Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPD_RHOBA5.587e-2433.67Anthranilate phosphoribosyltransferase OS=Rhodopir... [more]
TRPD_CORJK5.587e-2433.48Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_ANAVT5.587e-2432.73Anthranilate phosphoribosyltransferase OS=Anabaena... [more]
TRPD_SYNFM7.297e-2432.86Anthranilate phosphoribosyltransferase OS=Syntroph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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