CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.757e-62
Identity = 110/193 (56.99%), Postives = 150/193 (77.72%), Query Frame = -2
Query:  284 ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 862
            A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+  +D+WS GCIFAEM   +PLFPG S  D+L KIFR++GTPNE TWPGV+S  +FK+ +  +  ++L  ++ NL+  G++LLS +L M P  RITAR AL+H +F ++
Sbjct:  102 ALDLKIVKSFIFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNERTWPGVSSYANFKNNWQIFVPQDLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWFHEI 293          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.966e-61
Identity = 109/192 (56.77%), Postives = 146/192 (76.04%), Query Frame = -2
Query:  287 ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 862
            A + + +K F+YQ+LRGI +CH +RVLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YST +D+WS GCI AEM   RPLFPG S  D+L  IF+++GTPNE TWP ++SLP+++S F  +  ++L  ++  ++   +DLL  +L + P  RITAR +LEH +F +
Sbjct:  101 ALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAK-GQLKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEMFTGRPLFPGSSNDDQLQHIFKLMGTPNESTWPNISSLPNYRSNFQVYAPQDLRVIIPQIDNVALDLLLSLLQLKPENRITARQSLEHPWFAE 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.720e-61
Identity = 107/193 (55.44%), Postives = 149/193 (77.20%), Query Frame = -2
Query:  284 ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 862
            A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+T +D+WS GCIFAEM   +PLFPG +  D+L KIFR++GTPNE TWPG++   ++K+ +  +  ++L  +V NL+  G++LL  +L M P  RITAR AL+H +F ++
Sbjct:  102 ALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTPNERTWPGISQYTNYKNNWQIFVPQDLRLIVPNLDSMGLNLLQSLLQMRPESRITARQALQHPWFHEI 293          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.470e-61
Identity = 110/197 (55.84%), Postives = 145/197 (73.60%), Query Frame = -2
Query:  281 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP---------SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 844
            +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D +  A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS  VD+WS+GCIFAEM  ++PLF GDSEIDELF+IFR+LGTP E  W GV SLPD+K+ FPKW           K+ G  +  ++     LL  +L  DP+ RI+++ AL H YF D++
Sbjct:  117 LKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEK-GAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKKSGNYL--MDEDAFSLLEGLLIYDPALRISSKKALHHPYFNDID 310          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.470e-61
Identity = 108/191 (56.54%), Postives = 147/191 (76.96%), Query Frame = -2
Query:  278 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP--NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 844
            +K  +YQ+L G+++CH HR++HRDLKP N+L+    N++K+ADFGLARAF IP+ T+THEVVTLWYRAPEILLG +HY+  VD+WS+GCIFAE+   + LF GDSEI +LF+IF+VLGTP   E +W GV+SLPD++  FPKW  K L  V+  L+   +DLLS+ML  +P+ RI+A++AL+H +F D  F
Sbjct:  122 LKKIIYQLLEGLSFCHRHRIVHRDLKPANILVTT-DNSVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAELARGKVLFRGDSEIGQLFEIFQVLGTPMDAEGSWLGVSSLPDYRDVFPKWSGKPLTQVLPTLDGDAVDLLSQMLRYNPAERISAKAALQHPWFSDAMF 311          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.664e-60
Identity = 107/187 (57.22%), Postives = 148/187 (79.14%), Query Frame = -2
Query:  293 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 853
            P+ I++FL+Q+ +G+++CH+H VLHRDLKPQNLL+D+    LK+AD GLARAF +P++++THE+VTL YRAPE+LLGS HYST VD+ SVGCIFAEMV ++ LFPGDSE  +L  IFR+LGTP+++ WPGV+SL D+   +P+W  +     V +L P G+DLL+K L  DP+ RI+A++AL+H YF
Sbjct:  112 PQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPSDEQWPGVSSLRDW-HVYPQWEPQNSAPAVPSLGPDGLDLLTKTLKYDPADRISAKAALDHPYF 297          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.174e-60
Identity = 112/195 (57.44%), Postives = 141/195 (72.31%), Query Frame = -2
Query:  281 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL-------GTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 844
            +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D    A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS  VD+WS+GCIFAEM  ++PLF GDSEIDELF+IFRVLGTP E  W GV SLPD+K+ FPKW    L        T    L+     LL  +L  DPS R+ A+ AL H YF +++
Sbjct:  123 LKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNN-GAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYFDNMD 316          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.839e-60
Identity = 107/187 (57.22%), Postives = 141/187 (75.40%), Query Frame = -2
Query:  293 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 853
            P  +K F  Q+L+GI++CH +RVLHRDLKPQNLLI+ R   LKLADFGLAR+ GIPV TF++EVVTLWYRAP++LLGSR YST +D+WSVGCI AEM   RPLF G +  D+L KIFR+LGTP E +WPG++ LP++K  FP + +++L  +    +P G+DLL +ML + P  R T + AL+H +F
Sbjct:  100 PSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSR-GELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDALQHAWF 285          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.403e-59
Identity = 103/187 (55.08%), Postives = 139/187 (74.33%), Query Frame = -2
Query:  284 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 844
            ++  ++Q+L G+  CHS R +HRD+KP N+LIDR+ + +KLADFGL RAF +P++T+T EV+TLWYRAPE+LLG + Y   VDVWS+GC+FAE+  +R LF GD+ I++LF IF++LGTP E TW GVTSLP     FP+W +K L T V  L+  G+DLL +MLC +P  RITA  AL+H YF +V
Sbjct:  145 LRRIMFQLLLGLHECHSRRFVHRDIKPSNILIDRKESVVKLADFGLGRAFRVPLQTYTTEVMTLWYRAPEVLLGDKQYLPAVDVWSMGCVFAELARRRSLFAGDTAINQLFSIFQLLGTPTEATWRGVTSLPHHNVNFPRWTAKPLRTAVPALDDDGVDLLRRMLCYNPRERITAYEALQHSYFDEV 331          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.558e-58
Identity = 111/192 (57.81%), Postives = 143/192 (74.48%), Query Frame = -2
Query:  287 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 856
            DP ++K+F+YQ+L+G+A+CHS  VLHRDLKPQNLLI+R    LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N  RPLFPG+   D+L +IFR+LGTP E+ WP +T LPD+K  +P +P +  L  VV  L   G DLL  +L  +P +RI A  AL+H YF D
Sbjct:   99 DPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYPMYPATMSLVNVVPKLNATGRDLLQNLLKCNPVQRICADEALQHPYFAD 288          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_DEBHA6.757e-6256.99Negative regulator of the PHO system OS=Debaryomyc... [more]
PHO85_YARLI1.966e-6156.77Negative regulator of the PHO system OS=Yarrowia l... [more]
PHO85_CANAL5.720e-6155.44Negative regulator of the PHO system OS=Candida al... [more]
CDC2_CAEBR7.470e-6155.84Cell division control protein 2 homolog OS=Caenorh... [more]
CC2H3_TRYBB7.470e-6156.54Cell division control protein 2 homolog 3 OS=Trypa... [more]
CDC2C_ANTMA1.664e-6057.22Cell division control protein 2 homolog C OS=Antir... [more]
CDC2_CAEEL2.174e-6057.44Cell division control protein 2 homolog OS=Caenorh... [more]
PEF1_SCHPO2.839e-6057.22Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CC2H2_TRYBB2.403e-5955.08Cell division control protein 2 homolog 2 OS=Trypa... [more]
CDK5_XENLA1.558e-5857.81Cell division protein kinase 5 OS=Xenopus laevis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
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