CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.446e-78
Identity = 142/168 (84.52%), Postives = 153/168 (91.07%), Query Frame = 2
Query:  263 YGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            YGVVYKAR+  TNE IALKKIRLEQEDEGVPSTAIREISLLKEM H NIV L+DVVH EK+LYLVFEYLDLDLKKHMDSCP+F+ D  ++K FL QILRG+AYCHSHRVLHRDLKPQNLLIDR +N +KLADFGLARAFGIPV TFTHEVVTLWYRAPE+LLGSRHYS
Sbjct:    2 YGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHENIVNLKDVVHREKRLYLVFEYLDLDLKKHMDSCPEFSQDLHMVKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYS 169          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.450e-70
Identity = 127/182 (69.78%), Postives = 157/182 (86.26%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M++Y K+EK+GEGTYG+VYKA+N  T E +ALK+IRL+ EDEGVP TAIREISLLKE++H NIVRL DV+H+E+KL LVFEYLD DLKK++D C    + P  IK+F+YQ+L+G+A+CH HRVLHRDLKPQNLLI+R+   LKLADFGLARAFGIPV T++HEVVTLWYRAP++L+GSR YS
Sbjct:    1 MEKYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREISLLKELKHPNIVRLHDVIHTERKLTLVFEYLDQDLKKYLDECGGEISKP-TIKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRK-GELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYS 180          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC21_PEA (Cell division control protein 2 homolog 1 (Fragment) OS=Pisum sativum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.230e-70
Identity = 132/148 (89.19%), Postives = 138/148 (93.24%), Query Frame = 2
Query:  269 VVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEV 712
            VVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDS P+F  DPR +K FLYQ+L GIAYCHSHRVLHRDLKPQNLLIDRRTN +KLADFGLARAFGIPV TFTHEV
Sbjct:    1 VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNCVKLADFGLARAFGIPVRTFTHEV 148          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.509e-70
Identity = 129/182 (70.88%), Postives = 157/182 (86.26%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD ++KVEKIGEGTYGVVYKA+N  T + +ALKKIRL+ E EGVPSTAIREISLLKE++H NIVRL DVVH+E+KLYLVFE+L  DLKK+MDS P       LIK++L+Q+L+G+++CHSHRV+HRDLKPQNLLI+    A+KLADFGLARAFG+P+ T+THEVVTLWYRAPEILLGS+ Y+
Sbjct:    1 MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLIN-ELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYT 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.603e-69
Identity = 127/182 (69.78%), Postives = 155/182 (85.16%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD ++KVEKIGEGTYGVVYKARN VT + +ALKKIRL+ E EGVPSTA+REISLLKE++H NI++L DVVH EKKLY+VFE+L  DLK+HMDS P       ++K++L Q+L G+++CHSHRV+HRDLKPQNLL+D    A+KLADFGLARAFG+P+ T+THEVVTLWYRAPEILLGS+ YS
Sbjct:    1 MDVFQKVEKIGEGTYGVVYKARNKVTGQLVALKKIRLDLEAEGVPSTAVREISLLKELKHPNIIKLLDVVHREKKLYMVFEFLTQDLKRHMDSSPTSELPLPVVKSYLAQLLEGVSFCHSHRVIHRDLKPQNLLLD-GLGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYS 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.093e-69
Identity = 128/182 (70.33%), Postives = 155/182 (85.16%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ ++KVEKIGEGTYGVVYKA+N VT ET+ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLK+ MDS         L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+ +   +KLADFGLARAFG+PV T+THEVVTLWYRAPEILLG ++YS
Sbjct:    1 MESFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLHDVIHTENKLYLVFEFLHQDLKRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQ-GEIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 6.091e-69
Identity = 129/182 (70.88%), Postives = 154/182 (84.62%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PV T+THEVVTLWYRAPEILLG ++YS
Sbjct:    1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.091e-69
Identity = 127/183 (69.40%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD Y K+EKIGEGTYGVVYK RN  T + +A+KKIRLE E+EGVPSTA+REISLLKE+QH N+VRL DV+  E KLYLVFE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PV  +THEVVTLWYRAPE+LLG+  YS
Sbjct:    1 MDDYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLMQESKLYLVFEFLSMDLKKYLDSIPSGQFMDPMLVKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 259.61 bits (662), Expect = 1.357e-68
Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ ++KVEKIGEGTYGVVYKARN  T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L+ DLKK MD          L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PV TFTHEVVTLWYRAPEILLG + YS
Sbjct:    1 MENFQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-SDGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYS 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.314e-68
Identity = 127/182 (69.78%), Postives = 154/182 (84.62%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ ++KVEKIGEGTYGVVYKA+N +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PV T+THEVVTLWYRAPEILLG ++YS
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2B_ANTMA1.446e-7884.52Cell division control protein 2 homolog B (Fragmen... [more]
CDK5_DICDI1.450e-7069.78Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC21_PEA3.230e-7089.19Cell division control protein 2 homolog 1 (Fragmen... [more]
CDK3_HUMAN5.509e-7070.88Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK3_MOUSE1.603e-6969.78Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDK2_CARAU2.093e-6970.33Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK2_HUMAN6.091e-6970.88Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDC2_CARAU6.091e-6969.40Cell division control protein 2 homolog OS=Carassi... [more]
CDK2_XENLA1.357e-6870.88Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDK2_CRIGR2.314e-6869.78Cell division protein kinase 2 OS=Cricetulus grise... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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