CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.166e-66
Identity = 123/183 (67.21%), Postives = 151/183 (82.51%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+  +THEVVTLWYR+PE+LLGS  YS
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.166e-66
Identity = 121/183 (66.12%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PV  +THEVVTLWYRAPE+LLGS  YS
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.166e-66
Identity = 121/183 (66.12%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PV  +THEVVTLWYRAPE+LLGS  YS
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.166e-66
Identity = 121/183 (66.12%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PV  +THEVVTLWYRAPE+LLGS  YS
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.829e-66
Identity = 122/183 (66.67%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + + +KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+  +THEVVTLWYR+PE+LLGS  YS
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVTMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 251.906 bits (642), Expect = 2.829e-66
Identity = 123/183 (67.21%), Postives = 152/183 (83.06%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+ VT + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++L+QIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+  +THEVVTLWYR+PE+LLGS  YS
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 3.695e-66
Identity = 121/183 (66.12%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+  +THE +TLWYR+PE+LLGS  YS
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.826e-66
Identity = 120/183 (65.57%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGL+RAFG+PV  +THEVVTLWYRAPE+LLGS  YS
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYS 182          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.834e-65
Identity = 127/185 (68.65%), Postives = 150/185 (81.08%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-KLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            +  Y++ EK+GEGTYGVVYKA +    N  +ALKKIRLE EDEGVPSTAIREISLLKEM+  NIVRL D++HS+  KLYLVFE+LDLDLKK+M+S P        +IK F+ Q++RGI +CHSHRVLHRDLKPQNLLID+  N LKLADFGLARAFG+P+  +THEVVTLWYRAPEILLG + YS
Sbjct:    4 LSDYQRQEKVGEGTYGVVYKALDTKHNNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDDNIVRLYDIIHSDSHKLYLVFEFLDLDLKKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGN-LKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYS 187          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.395e-65
Identity = 123/183 (67.21%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD+Y K+EKIGEGTYGVVYK  +  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     +  L+K++LYQIL+GI +CH+ RVLHRDLKPQNLLID +   +KLADFGLARAFGIPV  +THEVVTLWYRAPE+LLGS  YS
Sbjct:    1 MDEYAKIEKIGEGTYGVVYKGVHKATGQIVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYS 182          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_RAT2.166e-6667.21Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_ORYLU2.166e-6666.12Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA2.166e-6666.12Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA2.166e-6666.12Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_PONAB2.829e-6666.67Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_MOUSE2.829e-6667.21Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_HUMAN3.695e-6666.12Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_ORYCU4.826e-6665.57Cell division control protein 2 homolog OS=Oryzias... [more]
CDC28_CANAL1.834e-6568.65Cell division control protein 28 OS=Candida albica... [more]
CDC2_RANDY2.395e-6567.21Cell division control protein 2 homolog OS=Rana dy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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