CF835956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.894e-42 Identity = 101/218 (46.33%), Postives = 132/218 (60.55%), Query Frame = 2 Query: 164 SPSVGSKDASFV*LLH*D*MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--------------HSEK---KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR-TFTHEVVTLWYRAPEILLGSRHY 763 SPS GS+ +D +EK+E+IGEGTYG VY AR T E +ALKKIR++ E EG P TAIREI +LK++ H N+++L+++V H K +Y+VFEY+D DL D P IK ++ Q+L G+ YCH ++VLHRD+K NLLID N LKLADFGLAR+F T+ V+TLWYR PE+LLGS Y Sbjct: 14 SPSWGSRS-----------VDCFEKLEQIGEGTYGQVYMARETETQEIVALKKIRMDNEREGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIHGNKYKGSIYMVFEYMDHDLTGLADR-PGMRFTVPQIKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGN-LKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKY 218
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK10_RAT (Cell division protein kinase 10 OS=Rattus norvegicus GN=Cdk10 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.894e-42 Identity = 84/183 (45.90%), Postives = 133/183 (72.68%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769 ++EK+ +IGEGTYG+VY+AR+ T+E +ALKK+R+++E +G+P +++REI+LL ++H NIV L++VV + + ++LV Y + DL +++ P ++ + +K L Q+LRG+ Y H ++HRDLK NLL+ + +K ADFGLARA+G+PV+ T +VVTLWYRAPE+LLG+ +T Sbjct: 36 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCILLQVLRGLQYLHRSFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTT 216
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.894e-42 Identity = 83/183 (45.36%), Postives = 134/183 (73.22%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769 ++EK+ +IGEGTYG+VY+AR+ T+E +ALKK+R+++E +G+P +++REI+LL ++H NIV L++VV + + ++LV Y + DL +++ P ++ + +K + Q+LRG+ Y H + ++HRDLK NLL+ + +K ADFGLARA+G+PV+ T +VVTLWYRAPE+LLG+ +T Sbjct: 38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTT 218
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.894e-42 Identity = 85/183 (46.45%), Postives = 134/183 (73.22%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769 ++EK+ +IGEGTYG+VY+AR+ T+E +ALKK+R+++E +GVP +++REI+LL ++H NIV L++VV + + ++LV Y + DL +++ P ++ + +K + Q+LRG+ Y H + ++HRDLK NLL+ + +K ADFGLARA+GIPV+ T +VVTLWYRAPE+LLG+ +T Sbjct: 36 EFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGIPVKPMTPKVVTLWYRAPELLLGTTTQTT 216
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK10_HUMAN (Cell division protein kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.392e-42 Identity = 83/183 (45.36%), Postives = 134/183 (73.22%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769 ++EK+ +IGEGTYG+VY+AR+ T+E +ALKK+R+++E +G+P +++REI+LL ++H NIV L++VV + + ++LV Y + DL +++ P ++ + +K + Q+LRG+ Y H + ++HRDLK NLL+ + +K ADFGLARA+G+PV+ T +VVTLWYRAPE+LLG+ +T Sbjct: 38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTT 218
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.067e-41 Identity = 92/198 (46.46%), Postives = 126/198 (63.64%), Query Frame = 2 Query: 221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK----------------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVTLWYRAPEILLGSRHY 763 +D +EK+E+IGEGTYG VY A+ T E +ALKKIR++ E EG P TAIREI +LK++ H N+++L+++V S + +Y+VFEY+D DL D P IK ++ Q+L G+ YCH ++VLHRD+K NLLID N LKLADFGLAR++ T+ V+TLWYR PE+LLG+ Y Sbjct: 23 VDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKY 218
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 9.230e-41 Identity = 92/198 (46.46%), Postives = 125/198 (63.13%), Query Frame = 2 Query: 221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK----------------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVTLWYRAPEILLGSRHY 763 +D +EK+E+IGEGTYG VY A+ T E +ALKKIR++ E EG P TAIREI +LK++ H N++ L+++V S + +Y+VFEY+D DL D P IK ++ Q+L G+ YCH ++VLHRD+K NLLID N LKLADFGLAR++ T+ V+TLWYR PE+LLG+ Y Sbjct: 23 VDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKY 218
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK7_MOUSE (Cell division protein kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 9.230e-41 Identity = 85/182 (46.70%), Postives = 120/182 (65.93%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763 +YEK++ +GEG + VYKAR+ TN+ +A+KKI+L E G+ TA+REI LL+E+ H NI+ L D + + LVF++++ DL+ + P IK ++ L+G+ Y H H +LHRDLKP NLL+D LKLADFGLA++FG P R +TH+VVT WYRAPE+L G+R Y Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 190
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.230e-41 Identity = 85/182 (46.70%), Postives = 120/182 (65.93%), Query Frame = 2 Query: 227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763 +YEK++ +GEG + VYKAR+ TN+ +A+KKI+L E G+ TA+REI LL+E+ H NI+ L D + + LVF++++ DL+ + P IK ++ L+G+ Y H H +LHRDLKP NLL+D LKLADFGLA++FG P R +TH+VVT WYRAPE+L G+R Y Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 190
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.205e-40 Identity = 81/185 (43.78%), Postives = 130/185 (70.27%), Query Frame = 2 Query: 221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769 +D++E++ I EGTYGVV++ R+ T E +ALKK+++E+E EG P T++RE+++L H +IV +++VV +++ +++V EY++ DLK M++ + +K + Q+L G+ Y H + VLHRDLK NLL++ R LK+ DFGL+R +G P++ +T VVTLWYRAPE+LLG++ YST Sbjct: 346 VDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNR-GELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYST 528 The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bpback to top |