CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.157e-67
Identity = 125/184 (67.93%), Postives = 153/184 (83.15%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YST
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.157e-67
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YST
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.157e-67
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YST
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.157e-67
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YST
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.511e-67
Identity = 124/184 (67.39%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + + +KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YST
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVTMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 256.144 bits (653), Expect = 1.511e-67
Identity = 125/184 (67.93%), Postives = 154/184 (83.70%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+ VT + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++L+QIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YST
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.973e-67
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THE +TLWYR+PE+LLGS  YST
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.577e-67
Identity = 122/184 (66.30%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGL+RAFG+PVR +THEVVTLWYRAPE+LLGS  YST
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.793e-67
Identity = 129/186 (69.35%), Postives = 152/186 (81.72%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-KLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            +  Y++ EK+GEGTYGVVYKA +    N  +ALKKIRLE EDEGVPSTAIREISLLKEM+  NIVRL D++HS+  KLYLVFE+LDLDLKK+M+S P        +IK F+ Q++RGI +CHSHRVLHRDLKPQNLLID+  N LKLADFGLARAFG+P+R +THEVVTLWYRAPEILLG + YST
Sbjct:    4 LSDYQRQEKVGEGTYGVVYKALDTKHNNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDDNIVRLYDIIHSDSHKLYLVFEFLDLDLKKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGN-LKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYST 188          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.279e-66
Identity = 125/184 (67.93%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            MD+Y K+EKIGEGTYGVVYK  +  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     +  L+K++LYQIL+GI +CH+ RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YST
Sbjct:    1 MDEYAKIEKIGEGTYGVVYKGVHKATGQIVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYST 183          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_RAT1.157e-6767.93Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_ORYLU1.157e-6766.85Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA1.157e-6766.85Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA1.157e-6766.85Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_PONAB1.511e-6767.39Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_MOUSE1.511e-6767.93Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_HUMAN1.973e-6766.85Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_ORYCU2.577e-6766.30Cell division control protein 2 homolog OS=Oryzias... [more]
CDC28_CANAL9.793e-6769.35Cell division control protein 28 OS=Candida albica... [more]
CDC2_RANDY1.279e-6667.93Cell division control protein 2 homolog OS=Rana dy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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