CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.182e-66
Identity = 128/183 (69.95%), Postives = 153/183 (83.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++Y  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YST
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYST 180          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.182e-66
Identity = 128/183 (69.95%), Postives = 153/183 (83.61%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++Y  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YST
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYST 180          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.849e-66
Identity = 124/184 (67.39%), Postives = 151/184 (82.07%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE+ H NIV LQDV+  + +LYL+FE+L +DLKK++D+ P     D   +K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYR+PE+LLGS  YST
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELHHPNIVCLQDVLMQDARLYLIFEFLSMDLKKYLDTIPSGQYLDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYST 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.860e-66
Identity = 133/204 (65.20%), Postives = 154/204 (75.49%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCP-------------------DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y+K+EKIGEGTYGVVYKAR+    N  +ALKKIRLE EDEGVPSTAIREISLLKEM   NIVRL ++VH++  KLYLVFE+LDLDLKK+M++ P                          ++K F+ Q++ GI YCHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYRAPEILLG R YST
Sbjct:    1 MENYQKIEKIGEGTYGVVYKARDLTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMHDPNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGGRQYST 203          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.347e-66
Identity = 125/182 (68.68%), Postives = 152/182 (83.52%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            + +Y+K+EK+GEGTYG VYKA+   T   +ALKKIRLE  D+GVPSTA+REISLLKE+ H N+V L DV+H + +LYLVFEYLD DLKK+MDS P  A  P+LIK++LYQ+L+G+AY H HR+LHRDLKPQNLLIDR+  ALKLADFGLARA  IPVR +THE+VTLWYRAPE+LLGS+ YS
Sbjct:    7 LSRYQKLEKLGEGTYGKVYKAKEKATGRMVALKKIRLE--DDGVPSTALREISLLKEVPHPNVVSLFDVLHCQNRLYLVFEYLDQDLKKYMDSVP--ALCPQLIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQ-GALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYS 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.083e-65
Identity = 126/183 (68.85%), Postives = 152/183 (83.06%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++Y  +EKIGEGTYGVVYKA+N    E+ ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEVVTLWYRAP+IL+GS+ YST
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNS-DGESFALKKIRLEKEDEGIPSTAIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVC-DGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYST 180          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.083e-65
Identity = 126/183 (68.85%), Postives = 152/183 (83.06%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++Y  +EKIGEGTYGVVYKA+N    E+ ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEVVTLWYRAP+IL+GS+ YST
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNS-DGESFALKKIRLEKEDEGIPSTAIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVC-DGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYST 180          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.847e-65
Identity = 120/183 (65.57%), Postives = 154/183 (84.15%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M +YEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+F+YQ+L+G+A+CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.847e-65
Identity = 131/203 (64.53%), Postives = 154/203 (75.86%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCP------------------DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y+K+EKIGEGTYGVVYKAR     N  +ALKKIRLE EDEGVPSTAIREISLLKEM   NIVRL ++VH++  KLYLVFE+LDLDLKK+M++ P                  +      ++K F+ Q++ GI +CHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYR+PEILLG R YST
Sbjct:    1 MENYQKIEKIGEGTYGVVYKARELTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMNDPNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGRALPDGSTLSRNLGLGDAMVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYST 202          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.150e-65
Identity = 119/183 (65.03%), Postives = 151/183 (82.51%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCP-DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ +EK+EKIGEGTYGVVYK RN +T + +A+KKIRLE +DEGVPSTAIREISLLKE++H NIV L+DV+  E ++YL+FE+L +DLKK+MDS P D   +  L++++LYQI   I +CH  RVLHRDLKPQNLLID ++  +K+ADFGL R+FGIPVR +THE+VTLWYRAPE+LLGS  YS
Sbjct:    1 MEDFEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKHENIVCLEDVLMEENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLKPQNLLID-KSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYS 182          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_PLAVI2.182e-6669.95Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAKH2.182e-6669.95Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2_CHICK2.849e-6667.39Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_AJECA4.860e-6665.20Cell division control protein 2 OS=Ajellomyces cap... [more]
CDC2_DICDI6.347e-6668.68Cell division control protein 2 homolog OS=Dictyos... [more]
CDC2H_PLACH1.083e-6568.85Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA1.083e-6568.85Cell division control protein 2 homolog OS=Plasmod... [more]
CDK5_XENLA1.847e-6565.57Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2_EMENI1.847e-6564.53Cell division control protein 2 OS=Emericella nidu... [more]
CDC2_DROME3.150e-6565.03Cell division control protein 2 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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