CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.173e-19
Identity = 56/155 (36.13%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT----FLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            M++YE    +G+GT+G V+ ARN  +N+++A+K +  +Q  + G+     REI+ ++ + H NIV+L +V+ +  K+Y V EY+     K  +     A   +L +     +  Q++  + YCHS  V HRDLKP+NLL+D   N LK++DFGL+
Sbjct:    9 MERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQVLKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYV-----KGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENEN-LKVSDFGLS 157          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19
Identity = 56/155 (36.13%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT----FLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            M++YE    +G+GT+G V+ ARN  +N+++A+K +  +Q  + G+     REI+ ++ + H NIV+L +V+ +  K+Y V EY+     K  +     A   +L +     +  Q++  + YCHS  V HRDLKP+NLL+D   N LK++DFGL+
Sbjct:    9 MERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQILKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYV-----KGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENEN-LKVSDFGLS 157          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEG-----------VPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKH-MDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL 745
            + Y KV K+G G YG V   +    +   A+K I+  Q D+G                  EISLLK + H NI++L DV   +K  YLV E+       +  + +H  D C D AN        + QIL GI Y H H ++HRD+KP+N+L++ + + L  K+ DFGL+  F    +     + T +Y APE+L
Sbjct:   55 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYNDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC-DAAN-------IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIAPEVL 239          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: AURKB_BOVIN (Serine/threonine-protein kinase 12 OS=Bos taurus GN=AURKB PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19
Identity = 63/183 (34.43%), Postives = 100/183 (54.64%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA-RAFGIPVRTFTHEVVTLWYRAPEILLGSRH 760
            +D +E    +G+G +G VY AR   ++  +ALK +   Q E EGV     REI +   +QH NI+RL +  +  +++YL+ EY    +L K +     F  D +   T + ++   + YCH+ +V+HRD+KP+NLL+  R   LK+ADFG +  A  +  +T      TL Y  PE++ G  H
Sbjct:   74 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSRTF--DEQRTATIMEELADALTYCHAKKVIHRDIKPENLLLGLR-GELKIADFGWSVHAPSLRRKTMCG---TLDYLPPEMIEGRTH 250          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.001e-19
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            Y+ V+ +GEG++G V  A +  T + +ALK I    L + D  +     REIS L+ ++H +I++L DV+ S+ ++ +V EY   +L  ++      +      + F  QI+  + YCH H+++HRDLKP+NLL+D   N +K+ADFGL+
Sbjct:   55 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLS 199          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.001e-19
Identity = 52/149 (34.90%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            +Y+ ++ +GEG++G V  A++  T + +ALK I R       +     REIS L+ ++H +I++L DV+ S+ ++ +V E+   +L  ++        D    + F  QI+  + YCH H+++HRDLKP+NLL+D + N +K+ADFGL+
Sbjct:   52 RYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFAGKELFDYIVQRGKMPEDEA--RRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLN-VKIADFGLS 197          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.001e-19
Identity = 62/183 (33.88%), Postives = 98/183 (53.55%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG 751
            + +Y+ +  IG G  G+V  A +      +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      YLV E +D +L + +        D   +   LYQ+L G  + HS  ++HRDLKP N+++ +    LK+ DFGLAR     +   T  VVT +YRAPE++LG
Sbjct:   23 LKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERLSYLLYQMLCGTKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG 199          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            Y+ V+ +GEG++G V  A +  T + +ALK I    L + D  +     REIS L+ ++H +I++L DV+ S+ ++ +V EY   +L  ++      +      + F  QI+  + YCH H+++HRDLKP+NLL+D   N +K+ADFGL+
Sbjct:   39 YQIVKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRNKMSEQEA--RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLS 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19
Identity = 59/184 (32.07%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            D YE V K+G G Y  V++  N  + E   +K ++  ++ +       REI +L+ +  G NIV+L DVV  +  K   L+FEY++  D K    +  D+      I+ ++Y++L+ + +CHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGINVNSKEKCIIKILKPVKKKK-----IRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD-----IRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 204          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: STK6_RAT (Serine/threonine-protein kinase 6 OS=Rattus norvegicus GN=Aurka PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19
Identity = 58/182 (31.87%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 760
            ++ ++    +G+G +G VY AR   +   +ALK + +++ E  GV     RE+ +   ++H NI+RL    H   ++YL+ EY  L  + + +     F  D +   T++ ++   ++YCHS RV+HRD+KP+NLL+      LK+ADFG   +   P    T    TL Y+ PE++ G  H
Sbjct:  123 LEDFDIGRPLGKGKFGNVYLAREKQSKFILALKVLFKVQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGW--SVHAPSSRRTTLCGTLDYQPPEMIEGRMH 299          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKE_ORYSJ1.173e-1936.13CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKF_ORYSJ1.532e-1936.13CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CDPK1_PLAYO1.532e-1934.02Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
AURKB_BOVIN1.532e-1934.43Serine/threonine-protein kinase 12 OS=Bos taurus G... [more]
SNF1_YEAST2.001e-1936.00Carbon catabolite-derepressing protein kinase OS=S... [more]
SNF1_CANAL2.001e-1934.90Carbon catabolite-derepressing protein kinase OS=C... [more]
MK08B_CYPCA2.001e-1933.88Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
SNF1_CANGA2.613e-1936.00Carbon catabolite-derepressing protein kinase OS=C... [more]
CSK21_ARATH2.613e-1932.07Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
STK6_RAT3.413e-1931.87Serine/threonine-protein kinase 6 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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