CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.760e-61
Identity = 113/183 (61.75%), Postives = 145/183 (79.23%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            +D + K+EKIGEGTYGVVYK RN  T   +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +LYL+FE+L  DLK++MD+       P   +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D +  A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS
Sbjct:   13 LDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLYLIFEFLSYDLKRYMDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEK-GAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYS 194          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.049e-60
Identity = 118/182 (64.84%), Postives = 148/182 (81.32%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Q++++EK+GEGTY  VYK RN  T + +ALK+I L+ E EG PSTAIREISL+KE++H NIV L DV+H+E KL LVFEY+D DLKK MD+  +  A + + +K F+YQ+LRGI +CH +RVLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YST
Sbjct:    6 QFQQLEKLGEGTYATVYKGRNRTTGQLVALKEINLDSE-EGTPSTAIREISLMKELKHENIVTLYDVIHTENKLNLVFEYMDKDLKKFMDTNGNKGALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAK-GQLKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYST 185          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.370e-60
Identity = 114/183 (62.30%), Postives = 150/183 (81.97%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M +Y+K+EKIGEGTYG V+K RN  T E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV+ ++ EVVTLWYR P++L G++ Y+T
Sbjct:    1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDLKKYFDSL-NGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTT 181          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 111/183 (60.66%), Postives = 144/183 (78.69%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ + K+EKIGEGTYGVVYK +N  TN  +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +L+L+FE+L  DLK++MD        P   +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D    A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS
Sbjct:   19 LNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVD-NNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYS 200          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.159e-59
Identity = 112/181 (61.88%), Postives = 142/181 (78.45%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            +Y+++EKIGEG+YGVVY+AR+  T+  +ALK+IRLE  +EGVP TAIREIS+LKE++H NIVRL DV HSE +L LVFEY+++DLKK+MD       DP  I+ F+  +L+G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV+ +THEVVTLWYR+P++LLGS  Y T
Sbjct:    4 RYQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENRLNLVFEYMEMDLKKYMDRASGNL-DPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISRE-KELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGT 182          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.583e-59
Identity = 114/183 (62.30%), Postives = 143/183 (78.14%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST 368          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.374e-59
Identity = 114/183 (62.30%), Postives = 142/183 (77.60%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C    +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST 368          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.406e-59
Identity = 116/179 (64.80%), Postives = 140/179 (78.21%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            +YE+ EKIGEGTYGVVYKAR+  T  T+ALK+IRL+ E+EGVP TAIREISLLKE++H NIV+L DV HSE +L +VFEYLDLDLKK++D   +   D   I+ F+  +LRG+A+CH   VLHRDLKPQNLLI R    LKL DFGL R+F IPVR FT+EVVTLWYR P++LLGS  Y
Sbjct:    4 RYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDR-ENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISRE-KELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQY 180          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.754e-59
Identity = 113/183 (61.75%), Postives = 143/183 (78.14%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ +   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST 368          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.816e-59
Identity = 113/182 (62.09%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMD-SCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Q++++EK+GEGTY  VYK RN  T   +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFEY+D DLKK+M+      A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+T
Sbjct:    7 QFQQLEKLGEGTYATVYKGRNRATGALVALKEISLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEYMDKDLKKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTT 186          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CAEBR2.760e-6161.75Cell division control protein 2 homolog OS=Caenorh... [more]
PHO85_YARLI1.049e-6064.84Negative regulator of the PHO system OS=Yarrowia l... [more]
CDK5_DROME1.370e-6062.30Cell division protein kinase 5 homolog OS=Drosophi... [more]
CDC2_CAEEL3.051e-6060.66Cell division control protein 2 homolog OS=Caenorh... [more]
CC2H1_TRYCO1.159e-5961.88Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK17_MOUSE2.583e-5962.30Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK17_RAT3.374e-5962.30Cell division protein kinase 17 OS=Rattus norvegic... [more]
CRK1_LEIME4.406e-5964.80Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDK17_HUMAN5.754e-5961.75Cell division protein kinase 17 OS=Homo sapiens GN... [more]
PHO85_CANAL9.816e-5962.09Negative regulator of the PHO system OS=Candida al... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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