CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9665 contig Csv1_Contig9665:49..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.187e-58
Identity = 114/186 (61.29%), Postives = 147/186 (79.03%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Q++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK+MDS     N PR     L+K F +Q+L+G+A+CH +++LHRDLKPQNLLI++R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YST
Sbjct:    6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS-RTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.856e-58
Identity = 115/186 (61.83%), Postives = 145/186 (77.96%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Q++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFEY+D DLKK+MDS     N PR     L+K F +Q+L G+A+CH +++LHRDLKPQNLLI +R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YST
Sbjct:    5 QFKQLEKLGNGTYATVYKGLNKSTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLYDVIHTENKLTLVFEYMDNDLKKYMDS-RTVGNAPRGLEMNLVKYFQWQLLEGLAFCHENKILHRDLKPQNLLITKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 187          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.856e-58
Identity = 111/183 (60.66%), Postives = 144/183 (78.69%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YST
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYST 341          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.730e-58
Identity = 111/183 (60.66%), Postives = 144/183 (78.69%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YST
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYST 341          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 8.309e-58
Identity = 110/181 (60.77%), Postives = 146/181 (80.66%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            Q++++EK+GEGTY  VYK RN    + +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFE++D DLKK+M++  +  A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+
Sbjct:    7 QFQQLEKLGEGTYATVYKGRNRTNGQLVALKEINLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEFMDKDLKKYMEAHGNQGALDLKIVKSFIFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYT 185          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 114/181 (62.98%), Postives = 145/181 (80.11%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Y+++EK+GEGTY  VYK +N VT E +ALK IR++  DEG PSTAIREISL+KE++H NI+ L DV+ +E KL LVFEY++ DLKK+MD+  +  A  P  +K F  Q+L+GI++CH +RVLHRDLKPQNLLI+ R   LKLADFGLAR+ GIPV TF++EVVTLWYRAP++LLGSR YST
Sbjct:    3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDA-DEGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSR-GELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYST 181          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.124e-57
Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            +YE+++KIGEG+YGVV++AR+  T   +A+K+IRLE+E+EGVP TAIREIS+LKE++H NIVRL DV HSEK+L LVFE +++DLKK+MD       D   I+ F+  +L G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV+ FT EVVTLWYR+P++LLGS  Y T
Sbjct:    4 RYERLQKIGEGSYGVVFRARDVTTGTIVAVKRIRLEKEEEGVPCTAIREISILKELRHENIVRLLDVCHSEKRLTLVFECMEMDLKKYMDHVGGDL-DAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISRE-KELKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGT 182          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.187e-57
Identity = 109/182 (59.89%), Postives = 142/182 (78.02%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLA A  IP +T+++EVVTLWYR P+ILLGS  YS
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLAYAKSIPTKTYSNEVVTLWYRPPDILLGSTDYS 340          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 105/183 (57.38%), Postives = 143/183 (78.14%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+++ L LVFEYLD DLK+++D C +  N    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMN-MHNVKIFMFQLLRGLAYCHRRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 297          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 105/183 (57.38%), Postives = 143/183 (78.14%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+++ L LVFEYLD DLK+++D C +  N    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMN-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 297          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_YEAST2.187e-5861.29Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
PHO85_CANGA2.856e-5861.83Negative regulator of the PHO system OS=Candida gl... [more]
CDK16_HUMAN2.856e-5860.66Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK16_MOUSE3.730e-5860.66Cell division protein kinase 16 OS=Mus musculus GN... [more]
PHO85_DEBHA8.309e-5860.77Negative regulator of the PHO system OS=Debaryomyc... [more]
PEF1_SCHPO1.085e-5762.98Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CC2H1_TRYBB4.124e-5760.77Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK16_RAT9.187e-5759.89Cell division protein kinase 16 OS=Rattus norvegic... [more]
CKD18_RAT1.200e-5657.38Cell division protein kinase 18 OS=Rattus norvegic... [more]
CDK18_MOUSE1.200e-5657.38Cell division protein kinase 18 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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