CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.047e-56
Identity = 111/186 (59.68%), Postives = 145/186 (77.96%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Q++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MD+  +  N  +     L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR+Y T
Sbjct:    6 QFKQLEKVGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLFDVIHTENKLTLVFEFMDNDLKKFMDN-RNKGNSHKGLEMDLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRNYCT 188          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.673e-56
Identity = 109/193 (56.48%), Postives = 145/193 (75.13%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK----LYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++YEK+EK+GEGTYG VYKA++  T + +ALKK RLE ++EG+P TA+REIS+L+ +     +VRL  V  + K     LYLVFE+LD DLKK +D+     N PR     +IK+FLYQ+ +G+A+CH H VLHRDLKPQNLL+D+    LK+AD GL RAF +P++++THE+VTLWYRAPE+LLGS HYST
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFVDAYRKGPN-PRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYST 192          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.777e-56
Identity = 111/186 (59.68%), Postives = 144/186 (77.42%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            +++++E++G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MDS  D    PR     L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ +   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR Y T
Sbjct:    8 RFKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKFMDSRLD-REMPRGLELSLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNK-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYCT 190          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 7.777e-56
Identity = 104/183 (56.83%), Postives = 142/183 (77.60%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMS-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 318          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 7.777e-56
Identity = 104/183 (56.83%), Postives = 142/183 (77.60%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMS-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 318          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55
Identity = 101/184 (54.89%), Postives = 143/184 (77.72%), Query Frame = 2
Query:  215 D*MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            D  D+Y +++ +GEGTYGVVY+A +  T + +ALKK+RL++ DEG+P TA+RE+S+L+E+ H NIV L DV+ ++ KLYL+FEY+D DLKK ++     A     +K  +YQ+L G+++CH HR++HRDLKP N+L+    N++K+ADFGLARAF IP+ T+THEVVTLWYRAPEILLG +HY+
Sbjct:   18 DQFDRYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICADGKLYLIFEYVDHDLKKALEK-RGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILV-TTDNSVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYT 199          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55
Identity = 111/200 (55.50%), Postives = 144/200 (72.00%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRL-----------QDVVHSEKK-LYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     IVRL             V HS K  LYLVFEYLD DLKK +DS    +N    +  L++ F++Q+ +G+A+CHSH VLHRDLKPQNLL+D+    LK+AD GL+RAF +P++ +THE+VTLWYRAPE+LLGS HYST
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYST 200          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55
Identity = 102/182 (56.04%), Postives = 137/182 (75.27%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN--DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            + ++K+EKIGEGTYGVVYKAR   TN  +ALKKIRLE E+EG+P+T IREI LLK ++H  IV L DV+++  K+YLVFEY++LDL++++D   D     +   ++    Q+L  + YCHS  + HRDLKPQN+L+D + N +KLADFGL RA GIP+RT+T EVVTLWYR PE+LLG ++Y
Sbjct:    3 ESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYNNNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKEN-IKLADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYY 183          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.467e-54
Identity = 108/194 (55.67%), Postives = 143/194 (73.71%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH------SEKKLYLVFEYLDLDLKKHMDSCPDFAND----PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EGVP TA+RE+SLL+ +     +VRL  V H       +  LYLVFEYLD DLKK +DS     N     P+ I++FL+Q+ +G+++CH+H VLHRDLKPQNLL+D+    LK+AD GLARAF +P++++THE+VTL YRAPE+LLGS HYST
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCAKNGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYST 194          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.574e-54
Identity = 104/191 (54.45%), Postives = 140/191 (73.30%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFANDPRL--IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            MD YEK+EK+GEGTYG VYKAR   T   +ALKK RL ++DEGVP TA+RE+SLL+ + Q  ++VRL D+   + K     LYLVFEY+D DLKK + +         +  +K  +YQ+ +G+A+CH   VLHRDLKP NLL+DR+T ALK+AD GL+R+F +P++ +THE++TLWYRAPE+LLG+ HYST
Sbjct:   25 MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYST 215          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_KLULA2.047e-5659.68Negative regulator of the PHO system OS=Kluyveromy... [more]
CKB11_ORYSJ2.673e-5656.48Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
PHO85_ASHGO7.777e-5659.68Negative regulator of the PHO system OS=Ashbya gos... [more]
CDK18_PONAB7.777e-5656.83Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN7.777e-5656.83Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CC2H3_TRYBB1.016e-5554.89Cell division control protein 2 homolog 3 OS=Trypa... [more]
CKB12_ARATH1.733e-5555.50Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDC28_ENCCU1.733e-5556.04Probable cell division control protein 28 homolog ... [more]
CDC2C_ANTMA1.467e-5455.67Cell division control protein 2 homolog C OS=Antir... [more]
CKB21_ORYSJ5.574e-5454.45Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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