CF835956

Overview
NameCF835956
Unique NameCF835956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.574e-54
Identity = 108/198 (54.55%), Postives = 142/198 (71.72%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH----------SEKKLYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     +VRL  V H          ++  LYLVFEYLD DLKK +DS     N    +P LI+  ++Q+ +G+A+CHSH VLHRDLKPQNLL+ +    LK+AD GL RAF +P++++THE+VTLWYRAPE+LLGS HYST
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSTSIYVVRLLCVEHVHQPSTKSQSTKSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYST 198          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.118e-53
Identity = 102/191 (53.40%), Postives = 140/191 (73.30%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            MD +EK+EK+GEGTYG VY+AR   T + +ALKK RL +++EGVPST +REIS+L+ +    ++VRL DV     K     LYLVFEY+D D+KK + S      +   + IK+ +YQ+ +G+A+CH H +LHRDLKP NLL+D +T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST
Sbjct:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQGLSKEGKTVLYLVFEYMDTDVKKFIRSFRSTGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYST 201          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.613e-53
Identity = 100/190 (52.63%), Postives = 138/190 (72.63%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS 766
            MD + K+EK+GEGTYG VY+A    T + +ALKK RL +++EGVP T +RE+SLL+ +    ++VRL DV   + K     LYLVFEY+D DLKK++ S         P  +K+ +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARA+ +P++ +THE++TLWYRAPE+LLG+ HYS
Sbjct:   11 MDAFVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYS 200          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.718e-53
Identity = 104/191 (54.45%), Postives = 140/191 (73.30%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDV---VHSEKK--LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            M+ +EK+EK+GEGTYG VY+AR   T   +ALKK RL +++EGVP T +REIS+L+ +    +IVRL DV   ++ E K  LYLVFEY+D DLKK + S      +     +K  +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST
Sbjct:   13 MEAFEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYST 203          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.162e-51
Identity = 104/182 (57.14%), Postives = 135/182 (74.18%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            D YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++MD  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST
Sbjct:  133 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYST 311          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.381e-51
Identity = 103/182 (56.59%), Postives = 135/182 (74.18%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            D YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++M+  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST
Sbjct:  133 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMEQHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYST 311          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.133e-49
Identity = 92/180 (51.11%), Postives = 132/180 (73.33%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            D+Y ++EK+GEG+YG+VYK  +  T  T+A+K+I L   D GVPSTA+RE+SLL+E+ H  +VRL DVV  E KL L+FEY++ DL+  +    + A     ++  ++Q+L G+  CHS R +HRD+KP N+LIDR+ + +KLADFGL RAF +P++T+T EV+TLWYRAPE+LLG + Y
Sbjct:   44 DRYSRIEKVGEGSYGIVYKCHDNFTGRTVAMKRIPLIVNDGGVPSTAVREVSLLRELNHPYVVRLLDVVLHEAKLLLIFEYMEQDLQGMLKQ-RNTAFVGGKLRRIMFQLLLGLHECHSRRFVHRDIKPSNILIDRKESVVKLADFGLGRAFRVPLQTYTTEVMTLWYRAPEVLLGDKQY 222          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.619e-47
Identity = 96/182 (52.75%), Postives = 132/182 (72.53%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            M +YEK +++GEGTYGVV KA + V N  +ALKKI+ E+ED+G+P T++REI++L E++H N+V L D+   +K LYLVFE+ D DL + M        N+ R I   +YQIL+G+A+CH H++LHRD+KPQN+LI+ +   +KL +FGLAR   I  R +T EVVTLWYRAPEILLG+  Y
Sbjct:    1 MTRYEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLELKHPNVVDLYDIYLEDKFLYLVFEFCDEDLYQFMSRSSKIPINETRSI---VYQILQGLAFCHYHQILHRDMKPQNILIN-KNGTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQY 178          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.123e-45
Identity = 95/180 (52.78%), Postives = 126/180 (70.00%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 769
            Y  +EK+GEG+Y  VYK  + +  + +ALK I +  E EGVP TAIRE SLLK ++H NIV L D+VH+++ L  VFEY+  DL ++M   P   + P  ++ F++Q+LRG+AY H  RVLHRDLKPQNLL+      LKLADFGLARA  IP +T++ EVVTLWYR P+ LLG+  YS+
Sbjct:  101 YLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIVHTKETLTFVFEYMHTDLAQYMSQHPGGLH-PHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLS-HLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSS 277          
BLAST of CF835956 vs. ExPASy Swiss-Prot
Match: CDKD2_ARATH (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.621e-45
Identity = 96/181 (53.04%), Postives = 123/181 (67.96%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 763
            +D+Y + + +GEGTYGVVYKA +  T +T+A+KKIRL  + EGV  TA+REI LLKE+ H +IV L D    +  L+LVFEY+  DL+  +     F + P  IK+++   L+G+AYCH   VLHRD+KP NLLI      LKLADFGLAR FG P R FTH+V   WYRAPE+L GSR Y
Sbjct:   10 VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNHPHIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLS-PGDIKSYMLMTLKGLAYCHKKWVLHRDMKPNNLLIG-ENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQY 188          
The following BLAST results are available for this feature:
BLAST of CF835956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB11_ARATH5.574e-5454.55Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB21_ARATH2.118e-5353.40Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA3.613e-5352.63Cell division control protein 2 homolog D OS=Antir... [more]
CKB22_ARATH4.718e-5354.45Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDK14_HUMAN1.162e-5157.14Cell division protein kinase 14 OS=Homo sapiens GN... [more]
CDK14_MOUSE3.381e-5156.59Cell division protein kinase 14 OS=Mus musculus GN... [more]
CC2H2_TRYBB4.133e-4951.11Cell division control protein 2 homolog 2 OS=Trypa... [more]
CDK2_ENTHI8.619e-4752.75Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK15_MOUSE2.123e-4552.78Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDKD2_ARATH3.621e-4553.04Cyclin-dependent kinase D-2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835956 ID=CF835956; Name=CF835956; organism=Citrus sinensis; type=EST; length=769bp
CTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTACT
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