CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROM0 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplO PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.142e-27 Identity = 70/132 (53.03%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V+L++L KKGLI + K PLKILG+G+L+ KL +A AF+ AK+K+E AG Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKLNVKLKVQAHAFTKVAKQKIEDAG 143
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROMP (50S ribosomal protein L15 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplO PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.771e-27 Identity = 72/139 (51.80%), Postives = 91/139 (65.47%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + VNL + + F E + V++++L KKK L P K PLKILG+GE+ KL +A AF+ AKEK+EAAG + ++ Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIVNLSKL--SEFKESEVVNIDSLVKKKLLFKP-----KFPLKILGNGEVKVKLKVQAHAFTKVAKEKIEAAGGSCEII 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27 Identity = 70/138 (50.72%), Postives = 92/138 (66.67%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + +NL ++ F + D V+L++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+E AG + +L Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNS9 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9902) GN=rplO PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.063e-26 Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PKYVPV----NLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELS-KKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ H L PK+ V LKD++ +G V+L++L K G++ K PLK+LG+GEL+ K L +A AF+TSA+ K+EAAG T L Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALKDLK-----DGATVNLDSLVKDGIVT----SPKHPLKMLGNGELTVKNLTVQASAFTTSARTKIEAAGGTCETL 150
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNSC (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9605) GN=rplO PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.388e-26 Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLK+LG+GEL +KKL +A AF++SA K+EAAG T +L Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNDLKDGSTVNLDSLVKDGIVT----SPKHPLKMLGNGELTAKKLTVQAAAFTSSALTKIEAAGGTCDIL 150
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.388e-26 Identity = 67/132 (50.76%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K PLKILG+G+++ KL +A +F+ AK+K+E AG Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHSFTKVAKQKIEDAG 143
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.813e-26 Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ H L L ++ + L EG V+L++L K G++ K PLK+LG+G L KL +A AF+ SAK K+E AG Sbjct: 22 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNGNLKVKLVVQAAAFTASAKTKIEGAG 144
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MICAN (50S ribosomal protein L15 OS=Microcystis aeruginosa (strain NIES-843) GN=rplO PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.813e-26 Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = -3 Query: 406 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAA 804 R GRG++AGQG SCG GMRGQKSR G G R GFEGGQMPLYRR+PKL+ +Y VNL+ + A EV+LE+L K ++ + PLK+LGDGE++ L KA AFS SAKEK+ AA Sbjct: 17 RRVGRGVSAGQGASCGLGMRGQKSRSGTGTRPGFEGGQMPLYRRVPKLKHFP---LVNPRQYTIVNLRKL--ASLPANTEVTLESLLKAKILTSNDG----PLKVLGDGEITVPLKVKAAAFSNSAKEKITAA 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNP2 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplO PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26 Identity = 70/134 (52.24%), Postives = 81/134 (60.45%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGIAAGQG SCGFGMRGQKSR G G + GFEGGQMPLYRR+PKL+ L D+ A EV+LE+L G++ + PLK+LGDGELS L A AFS AK K+EAAG Sbjct: 17 RRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFTIVNPKNFTIVNVGQLTDLPA-----NTEVTLESLMAAGIVTTNDG----PLKVLGDGELSVALKVTAAAFSNGAKAKIEAAG 141
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26 Identity = 69/134 (51.49%), Postives = 86/134 (64.18%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGIAAGQG SCG GMRGQK+R G G R GFEGGQ PLYRR+PKL+ + P+Y +NL+ + A G EVSLE+L G++ + PLKILGDGE+ L +A A + SA+ K+EAAG Sbjct: 17 RRLGRGIAAGQGASCGKGMRGQKARKGGGPRPGFEGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTNDG----PLKILGDGEVGVPLTIRAAAITPSARAKVEAAG 142 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |