CF835984

Overview
NameCF835984
Unique NameCF835984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LISMF (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplO PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.138e-20
Identity = 60/131 (45.80%), Postives = 79/131 (60.31%), Query Frame = -3 
Query:  403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795
            GRG  +G G + G G +GQK+R G GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:   20 GRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LISMC (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplO PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.138e-20
Identity = 60/131 (45.80%), Postives = 79/131 (60.31%), Query Frame = -3 
Query:  403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795
            GRG  +G G + G G +GQK+R G GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:   20 GRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRZT (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRZP (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain P1031) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRZJ (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain JJA) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRR6 (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRPS (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain CGSP14) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRPN (50S ribosomal protein L15 OS=Streptococcus pneumoniae GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRPJ (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRPI (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rplO PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = -3 
Query:  385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795
            GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:   20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_LISMF1.138e-2045.8050S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_LISMC1.138e-2045.8050S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_STRZT1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRZP1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRZJ1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRR61.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRPS1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRPN1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRPJ1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRPI1.942e-2043.0750S ribosomal protein L15 OS=Streptococcus pneumon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02D20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bp
TTTTTTTTTTTTTTTCAATCAATGGTGATCTAATCAACATAATACCTGTA
GATTTGGCTTTCCAGCTAAGTAACATGAGAATCAGAACATTGAGAGTTTA
GCTGAATTTTTAAAAGGGAGGGGATACAAAGAAGAGACAAATTCCAGAAA
TTACAGCTATAGACATCCTCCTCTCATTTCGCTACCCCGAAAACCTAAAA
CCAGAGAAAAAGAATCGAAGACAATTCAATGGCTCTACTTAGTTACAGTG
AGTGAAAAAAACCAAGTGGTTCAAGCTGAAGTTGAATCGGATGCAGCTGC
AGCAGCTCTCTTCTTGGCGAAGTATTCTTCAGCTCGTGCAAGGTTCTTAG
CTACTGATGGTTTCACCCACTTCTTTCGGCCAGGTAAGACAGTGAGGGTA
CAGCCTGCAGCTTCAAGCTTCTCCTTTGCTGATGTAGAGAAGGCACGAGC
CTTGAAGTTCAGCTTCTTGCTTAATTCTCCATCACCAAGAATCTTTAAAG
GCAGTTTCCTTTCTCTTCCTGAGGGATTGATCAAGCCCTTCTTCTTCAAA
GTCTCTAGTGAGACTTCATCCCCCTCTAGAAAACCAGCTGCTTCTATGTC
TTTCAAGTTAACAGGGACATACTTAGGTAACCCAGCATGCATACCTCCGG
CAATCCCACGGAGCTTAGGAATTCGACGATAAAGAGGCATTTGACCACCT
TCAAAACCCTTTCTAACGCCAGGACCAAACCTCGATTTCTGACCTCTCAT
TCCAAACCCACAGCTGTTACCTTGCCCAGCTGCTATTCCTCTCCCCCTTT
CTCTTC
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