CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_FUSNN (50S ribosomal protein L15 OS=Fusobacterium nucleatum subsp. nucleatum GN=rplO PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.312e-20 Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G GQ SR G GV+ FEGGQMP+YRR+PK RG + + +Y ++L + F +G+EVSLETL K LI GR+ +K+LG+GEL+KKL K S SAK +EA G T+ ++ Sbjct: 19 GRGNSSGWGKTAGKGSNGQNSRAGGGVKPYFEGGQMPIYRRVPK-RGFSNAIFK--KEYTVISLAFLN-ENFEDGEEVSLETLFNKCLIK-KGRD---GVKVLGNGELNKKLTVKVHKISKSAKAAVEAKGGTVELV 147
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACH4 (50S ribosomal protein L15 OS=Lactobacillus helveticus (strain DPC 4571) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 58/137 (42.34%), Postives = 83/137 (60.58%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+R +PK G + +Y VNL D+ F +G EV++ETLK+ GL+ ++ +K+LG+GEL KL K S +AK+ +EAAG T+ V+ Sbjct: 20 GRGTSSGYGKTSGRGQKGQLARQGGHTRLGFEGGQMPLFRTMPK----RGFKNINRKEYAIVNLDDLNK--FNDGSEVTVETLKENGLV----KKELSGVKLLGNGELKVKLTVKVNKVSAAAKKAVEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLONN (50S ribosomal protein L15 OS=Clostridium novyi (strain NT) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 60/131 (45.80%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G G + G G +GQ +R G GVR GFEGGQMPLYRR+PK G + +YV VN+ + F +G EV+ E LK G+I+ + K +KILG+G L KKL KA F+ A EK+E+ G Sbjct: 20 GRGNGSGLGKTAGKGHKGQNARSGGGVRPGFEGGQMPLYRRLPK----RGFTNIFAKEYVEVNVSRLNI--FEDGTEVTPEVLKANGVIS----KVKDGVKILGNGTLEKKLTIKATKFTKGAVEKIESIG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOBM (50S ribosomal protein L15 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGKGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOBL (50S ribosomal protein L15 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGKGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOBK (50S ribosomal protein L15 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOBJ (50S ribosomal protein L15 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOBH (50S ribosomal protein L15 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOB6 (50S ribosomal protein L15 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOB1 (50S ribosomal protein L15 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G + G G GQ SR G GVR GFEGGQMPLYRR+PK G + +Y +NL + F +G V+ E L +K ++ ++ K +KILG+G + KKL KA FS SA EK+EAAG + V+ Sbjct: 20 GRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPK----RGFKNIFAKEYAAINLDRLNC--FEDGTVVTPELLVEKRVV----KKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI 146 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |