CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STACT (50S ribosomal protein L15 OS=Staphylococcus carnosus (strain TM300) GN=rplO PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20 Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG A G G + G G +GQK+R G VR GFEGGQ+PL+RR+PK G + ++ VNL+ + F EG EV+ E L + G++ + K +K+LG+G L KKL KA FS SA E ++A G Sbjct: 20 GRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPLFRRLPK----RGFTNINRKEFAVVNLEQLNR--FEEGTEVTPELLIETGVV----KNAKAGIKVLGNGSLEKKLTVKAHNFSASAAEAIDAKG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACPL (50S ribosomal protein L15 OS=Lactobacillus plantarum GN=rplO PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20 Identity = 62/134 (46.27%), Postives = 82/134 (61.19%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRG ++GQG + G G +GQK+R VR GFEGGQMPLYRRIPK G + +Y VNL + F +G EV+ E+LK+ GL+ S +K+LG+G+L+KKL KA FS +A +EAAG Sbjct: 17 RRIGRGDSSGQGKTSGRGQKGQKAR--GKVRVGFEGGQMPLYRRIPK----RGFTNINRKEYAVVNLDGLNR--FDDGAEVTPESLKEAGLVKKSS-----AVKVLGNGKLNKKLTVKASKFSATAVAAIEAAG 137
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACGA (50S ribosomal protein L15 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rplO PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20 Identity = 56/137 (40.88%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+RR+PK G + +Y +NL D+ F +G EV+++TLK GL+ ++ +K+L +GEL KL K S +AK+ +EAAG T+ V+ Sbjct: 20 GRGTSSGYGKTAGRGQKGQLARTGGKTRLGFEGGQMPLFRRMPK----RGFKNVNRKEYAIINLNDLNR--FDDGSEVTIDTLKSSGLV----KKELAGVKLLANGELKVKLTVKVNKVSEAAKKAVEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACAC (50S ribosomal protein L15 OS=Lactobacillus acidophilus GN=rplO PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20 Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+R +PK G + +Y VNL D+ F +G EV++ TLK+ GL+ ++ +K+LG+GEL KL K S +AKE +EAAG T+ V+ Sbjct: 20 GRGTSSGYGKTSGRGQKGQLARQGGHTRLGFEGGQMPLFRTMPK----RGFKNVNRKEYAIVNLDDLNK--FEDGSEVTVATLKENGLV----KKELSGVKLLGNGELKVKLTVKVNKVSAAAKEAVEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ROSS1 (50S ribosomal protein L15 OS=Roseiflexus sp. (strain RS-1) GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 403 RER---GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 RER GRGI +G+G + G GM GQK+R GP FEGGQM + R++PKLRG +Y +N+ + +G E+++E + +G I+P+ P+KILGDGEL +KL A FS SA+ ++EAAG Sbjct: 14 RERKRIGRGIGSGKGKTGGKGMMGQKARSGPKPSPSFEGGQMRITRKMPKLRGFKNRWRV---EYQVINIGQLNDVP--DGTELTIEEMVAQGWIHPA-----KPVKILGDGELERKLTIHAHKFSASARARIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_NATTJ (50S ribosomal protein L15 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = -3 Query: 385 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 804 + +GRG+++G G + G G +GQ +R G GVR GFEGGQMPL R+PK G +A +Y VN++ + F EG E++ E L + +I + K +K+LG GE+ KK+ KA FS AKEK+E AG + V+ Sbjct: 17 KRKGRGMSSGLGKTAGRGHKGQNARTGGGVRPGFEGGQMPLQERLPK----RGFTNAFKKEYAIVNVETLN--DFEEGTEITPEVLLESKVI----KGVKDGIKVLGKGEIDKKITVKAHKFSKQAKEKIEEAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACJO (50S ribosomal protein L15 OS=Lactobacillus johnsonii GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 56/137 (40.88%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+RR+PK G + +Y +NL D+ F +G EV+++TLK GL+ ++ +K+L +GEL KL K S +AK+ +EAAG T+ V+ Sbjct: 20 GRGTSSGYGKTAGRGQKGQLARTGGKTRLGFEGGQMPLFRRMPK----RGFKNVNRKEYAIINLNDLNR--FDDGSEVTIDTLKSSGLV----KKELAGVKLLANGELKVKLTVKVNKASEAAKKAVEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_EXISA (50S ribosomal protein L15 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG+A G G + G G +GQK+R G GVR GFEGGQ PLYRR+PK G + +Y V+L + F G EV+ E L + G+++ + K +K+L +G+L KL KA FS +AKE +EAAG T+ V+ Sbjct: 20 GRGMATGNGKTSGRGHKGQKARSGGGVRPGFEGGQNPLYRRLPK----RGFNNPTRKEYAVVSLDTLNR--FEAGTEVTPELLIETGVVSSA----KDGIKVLANGKLETKLTVKANKFSGAAKEAIEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOAB (50S ribosomal protein L15 OS=Clostridium acetobutylicum GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G G + G G +GQ +R G GVR GFEGGQMPLYRR+PK RG + A V V+ +I F +G EV+++ L +KG+I ++ +KILG+GEL KKL K +S SA EK+EAAG Sbjct: 20 GRGTGSGLGRNAGKGEKGQNARSGGGVRPGFEGGQMPLYRRLPK-RGFT-NIFAKTITAVNVDRLNI----FEDGTEVTIDALIEKGII----KKVNDGVKILGNGELKKKLVVKVNKYSKSAAEKIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STAHJ (50S ribosomal protein L15 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplO PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G G + G G +GQK+R G GVR GFEGGQ+PL+RR+PK G + +Y VNL + F +G EV+ L + G++ + K +K+LG+G L KKL KA FS SA E ++A G Sbjct: 20 GRGAGSGNGKTSGRGQKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVETGVV----KNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKG 140 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |