CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BACC4 (50S ribosomal protein L15 OS=Bacillus cereus (strain B4264) GN=rplO PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19 Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRGI +G G + G G +GQ +R G GVR GFEGGQ PL+RR+PK G + ++ VNL + F +G EV+ E L + G+I+ + +K+L G + KKL KA FS+SAKE +EAAG ++ V+ Sbjct: 20 GRGIGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEFAIVNLSTLNR--FEDGTEVTPELLLETGVIS----KLNDGVKVLASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACDB (50S ribosomal protein L15 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rplO PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19 Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+R +PK G + +Y VNL D+ F EG V E LK KGL+ +++ +K+LG+G+L+ KL K S +AK +EAAG T+ V+ Sbjct: 20 GRGTSSGFGKTSGRGQKGQHARSGGNTRLGFEGGQMPLFRTMPK----RGFKNINRKEYAIVNLADLNK--FEEGSVVDFEALKAKGLV----KKQLSGVKVLGNGDLNVKLTVKVNKVSEAAKSAIEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACDA (50S ribosomal protein L15 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rplO PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19 Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQ +R G R GFEGGQMPL+R +PK G + +Y VNL D+ F EG V E LK KGL+ +++ +K+LG+G+L+ KL K S +AK +EAAG T+ V+ Sbjct: 20 GRGTSSGFGKTSGRGQKGQHARSGGNTRLGFEGGQMPLFRTMPK----RGFKNINRKEYAIVNLADLNK--FEEGSVVDFEALKAKGLV----KKQLSGVKVLGNGDLNVKLTVKVNKVSEAAKSAIEAAGGTVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CORDI (50S ribosomal protein L15 OS=Corynebacterium diphtheriae GN=rplO PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19 Identity = 60/135 (44.44%), Postives = 82/135 (60.74%), Query Frame = -3 Query: 391 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 795 GRG A +G + G G +G K+R V FEGGQMPL+ R+PKL+G Y VN+ D+E A F +G E+++ + KGL+ P K P+K+LG+GE+S KLN A FS SA EK+EAAG ++T Sbjct: 24 GRG-EASKGKTAGRGTKGTKAR--KQVSAAFEGGQMPLHMRLPKLKGFKNPAKV---YYQVVNVSDLEKA-FPQGGEIAVADIVAKGLVRP-----KQPVKVLGNGEISVKLNVTATKFSKSAVEKIEAAGGSVT 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRMU (50S ribosomal protein L15 OS=Streptococcus mutans GN=rplO PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19 Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQK+R G +R GFEGGQ PL+RR+PK G + +Y VNL + F +G EV+ L + G++ + K +KILG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 20 GRGSSSGNGKTAGRGQKGQKARSGGNIRSGFEGGQTPLFRRLPK----RGFTNINAKEYALVNLDQLNV--FEDGAEVTPVVLVETGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEAAIIAKGGSIEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PELTS (50S ribosomal protein L15 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplO PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19 Identity = 58/132 (43.94%), Postives = 80/132 (60.61%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 RG+GI +G G + G G +GQK+R G GVR GFEGGQMPL RR+PK RG + + VN++ + F G V+ E L +I +G +KILG+G L K L +A AFS++A++K+EAAG Sbjct: 19 RGQGIGSGMGKTAGRGHKGQKARSGGGVRPGFEGGQMPLQRRMPK-RGFTNRFK---KEIIAVNIEKLNR--FENGTTVTPEALLAARVIKKTGD----GVKILGNGNLEKSLTVQAHAFSSTARQKIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LACBA (50S ribosomal protein L15 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rplO PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19 Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG ++G G + G G +GQK+R R GFEGGQMPLYRRIPK G + ++ VNL + F +G EV+ L + G++ + K +KILG+GELSKKL KA FS SA E +EAAG Sbjct: 20 GRGDSSGNGKTAGRGQKGQKAR--SKTRLGFEGGQMPLYRRIPK----RGFTNINRKEFAVVNLSALNV--FDDGAEVTPAALVEAGIV----KNEKAGIKILGNGELSKKLTVKAAKFSKSAAEAIEAAG 138
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STAEQ (50S ribosomal protein L15 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rplO PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG A G G + G G +GQK+R G +R GFEGGQ+PL+RR+PK G + +Y VNL + F +G EV+ L + G++ + K +K+LG+G L KKL KA FS SA E ++A G Sbjct: 20 GRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKVLGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PSYWF (50S ribosomal protein L15 OS=Psychrobacter sp. (strain PRwf-1) GN=rplO PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 370 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKK 798 +GRGI +G G + G G++GQKSR G GVR+GFEGGQMPL+RR+PK G M + V L ++ ++GD VS+ETLK +I R +I+ GE++K FK + AK +EAAG T+ V G ++ Sbjct: 21 KGRGIGSGLGKTGGRGVKGQKSRSGSGVRRGFEGGQMPLFRRVPKF-GFTSQMALTTAE---VRLSELNK---IDGDVVSVETLKAANII----RHDMKRARIILSGEITKAYTFKGVKVTKGAKAAIEAAGGTVEVTEGTEE 152
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PELCD (50S ribosomal protein L15 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rplO PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G G + G G +GQ +R G GV+ GFEGGQMPL RR+PK G Y VNL+D++ F G V +E L + GL++ +KILGDG+L K L KA FS SA K+EAAG Sbjct: 20 GRGPGSGNGKTAGKGHKGQNARSGGGVKPGFEGGQMPLQRRLPK----RGFKSLNKKVYALVNLRDLQDI-FEAGSVVDIEALGQNGLVS----RIYDGIKILGDGDLDKALTVKAHKFSQSAIAKIEAAG 141 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |