CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ANASP (50S ribosomal protein L15 OS=Anabaena sp. (strain PCC 7120) GN=rplO PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26 Identity = 70/140 (50.00%), Postives = 88/140 (62.86%), Query Frame = -3 Query: 385 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 804 R GRGI+AGQG S G GMRGQKSR G G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ + K PLKILG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 17 RRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRAAGILTAA----KGPLKILGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.093e-26 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = -3 Query: 385 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 804 R GRG++AGQG SCG GMRGQK+R G R GFEGGQ PLYRR+PKL+ + +Y VNL+ + A G EVSLE+L ++G++ + PLKILGDGE+S L +A A + SAK K+EAAG + +L Sbjct: 17 RRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGEVSVPLTIRAAAITASAKVKVEAAGGRVEIL 148
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNPX (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH8102) GN=rplO PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.039e-26 Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLKILG+G+L +KKL +A AF+ SA+ K+EAAG Sbjct: 22 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVKDGVVT----SPKHPLKILGNGDLTAKKLTVQAAAFTASARTKIEAAG 145
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.275e-26 Identity = 69/140 (49.29%), Postives = 87/140 (62.14%), Query Frame = -3 Query: 385 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 804 R GRGI+AGQG S G GMRGQKSR G G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ K PLK+LG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 17 RRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROM5 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplO PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.998e-26 Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ Y VNL + + F + + V++++L KKK L P K PLKILG+G + KL +A AF+ A+EK+E+AG + VL Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNYSIVNLSKL--SEFKDNEIVNIDSLVKKKLLFKP-----KFPLKILGNGVVKVKLKVQAHAFTKVAQEKIESAGGSCEVL 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNR3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain RCC307) GN=rplO PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.175e-25 Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ ++ VN+ E A G V+ ++L + G++ K LK+LGDGEL KL A AF+ SA+EK+EAAG Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFT---LVNPKRFTVVNVG--ELAELKAGTVVTRDSLTEAGILT----SPKHALKVLGDGELKVKLTVHAAAFTASAREKIEAAG 143
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROMT (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL2A) GN=rplO PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G+L KL +A AF+ SAK K+E G Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGKLEVKLTVQAAAFTASAKNKIEEVG 143
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PROM1 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL1A) GN=rplO PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 403 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 798 +GRGIAAGQG SCGFGMRGQKSR G R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G L KL +A AF+ SAK+K+E G Sbjct: 21 KGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGNLEVKLTVQAAAFTASAKKKIEEVG 143
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_TRIEI (50S ribosomal protein L15 OS=Trichodesmium erythraeum (strain IMS101) GN=rplO PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.697e-24 Identity = 67/134 (50.00%), Postives = 82/134 (61.19%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGI+AGQG SCG GMRGQKSR G R GFEGGQ PLYRR+PKL+G KY +N+ + + EV+L +L K G+I PLKILGDG+L+ L A AF+ SA+ K+EAAG Sbjct: 17 RRVGRGISAGQGASCGKGMRGQKSRSGGSTRPGFEGGQNPLYRRLPKLKGFP---MVNRKKYTIINVSKL--SSLPANTEVTLASLIKVGIITTDDG----PLKILGDGDLNIPLKVYAAAFTASARSKIEAAG 141
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_NOSP7 (50S ribosomal protein L15 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplO PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.697e-24 Identity = 67/136 (49.26%), Postives = 85/136 (62.50%), Query Frame = -3 Query: 385 RGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 792 RGI+AGQG S G GMRGQKSR G G R GFEGGQ PLYRR+PKL+G Y +N++ + A EV+L +LK G++ K PLKILG+GELS L +A AF+ +A+ K+EAAG + VL Sbjct: 21 RGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRLPKLKGFP---IVNQKIYTTINVEKL--ASLPANTEVTLASLKAAGILTAV----KGPLKILGNGELSTPLKVQAAAFTGTARSKIEAAGGSCEVL 147 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |