CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CYAA5 (50S ribosomal protein L15 OS=Cyanothece sp. (strain ATCC 51142) GN=rplO PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.938e-24 Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLR--GIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGI+AGQG S GFGMRGQKSR G G + GFEGGQMPLYRR+PKL+ + H Y +N+ + + EV+LE+L + GLI + PLK+LG+GEL+ L +A F+ SAK K+E+AG Sbjct: 17 RRIGRGISAGQGASGGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFPLVNPSH-----YTIINVGKLNSLS--PNTEVTLESLMEVGLITSNDG----PLKVLGNGELTVPLTVRAPKFTASAKAKIESAG 141
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.422e-24 Identity = 68/137 (49.64%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGIAAGQG S GFGMRGQKSR G R GFEGGQ PLYRR+PKL+ H L K Y +N+ + V++++L + G++ + K PLK+LGDGEL+ KL A AFS SA+ K+EAAG Sbjct: 17 RRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ACAM1 (50S ribosomal protein L15 OS=Acaryochloris marina (strain MBIC 11017) GN=rplO PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGIAAGQG SCGFGMRGQKSR G R GFEGGQ PLYRR+PKL+ +Y +N L +++A +V+LE+L +G+I + PLK+LGDGEL+ LN +A A + SA K+E AG Sbjct: 17 RRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQNPLYRRVPKLKHFT---LINQKQYTTINVGKLNELKAK-----SDVTLESLMAEGIITSNDG----PLKVLGDGELTVALNVQAAAATQSAIAKVEGAG 141
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 66/137 (48.18%), Postives = 84/137 (61.31%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGIAAGQG SCGFGMRGQKSR G G + GFEGGQMPLYRR+PKL+ P Y P + + + AG V+LE+L + G++ + PLK+LG+GEL+ L A S +A+ K+EAAG Sbjct: 17 RRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGELAVALTVHAPC-SKAAQAKIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_GLOVI (50S ribosomal protein L15 OS=Gloeobacter violaceus GN=rplO PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = -3 Query: 388 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 795 GRG +AGQG + G GMRGQK R G GVR GFEGGQ+PLY R+PKL+G Y VNLK + EV++ETL G++ + PL++LGDGE L A F+ SA+EK+EAAG T TV Sbjct: 23 GRGHSAGQGKTSGRGMRGQKCRSGGGVRPGFEGGQIPLYMRLPKLKGFE---LVNPSSYTIVNLKQLR--DLPADSEVNIETLLDAGILTATSG----PLRVLGDGEAHVALQITAAYFTASAREKIEAAGGTCTV 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BACSU (50S ribosomal protein L15 OS=Bacillus subtilis GN=rplO PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 65/137 (47.45%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRGI +G G + G G +GQ +R G GVR GFEGGQMPL++R+PK G + +Y VNL + GF EG EV+ E L + G+I+ + +KILG+G+L KKL KA FS SAKE +EAAG T V+ Sbjct: 20 GRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEYAVVNLDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BACLD (50S ribosomal protein L15 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplO PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.200e-23 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRGI +G G + G G +GQ +R G GVR GFEGGQMPL++R+PK G + ++ VNL + + F EG EV+ E L + G+I+ + K +KILGDG+L KKL KA FS SAK+ +EAAG T V+ Sbjct: 20 GRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEFAVVNLDKLNS--FAEGTEVTPELLLETGVIS----KLKSGVKILGDGKLEKKLTVKANKFSASAKQAIEAAGGTAEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ANOFW (50S ribosomal protein L15 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplO PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.459e-23 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRGI +G G + G G +GQ +R G GVR GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ E L + G+++ + K +K+LGDGEL+KKL KA FS SAKE +EAAG T V+ Sbjct: 20 GRGIGSGNGKTSGKGHKGQNARSGGGVRIGFEGGQTPLFRRLPK----RGFTNIHRKEYAIVNLEALNR--FEDGTEVTPELLLETGVVS----KLKAGIKVLGDGELTKKLTVKAHKFSASAKEAIEAAGGTTEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_FINM2 (50S ribosomal protein L15 OS=Finegoldia magna (strain ATCC 29328) GN=rplO PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.312e-23 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G G++ G G GQ SR G GVR GFEGGQMPL+RR+PK G + +Y +N++D+ F +G+E++ E L G P+ + K +KILGDGE++KKL KA F+ SA+EK+ AG + V+ Sbjct: 21 GRGYGSGLGHNAGRGRDGQNSRSGGGVRPGFEGGQMPLFRRLPK----RGFKNHFAKQYAEINIRDLNC--FEDGEEITPEILANAGFFKPA--KAKDGVKILGDGEITKKLTIKANKFTKSAEEKITKAGGKVEVI 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BACA2 (50S ribosomal protein L15 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplO PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.312e-23 Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRGI +G G + G G +GQ +R G GVR GFEGGQMPL++R+PK G + Y VN+ + GF EG EV+ E L + G+I+ + +KILG+G+L KKL KA FS SAKE +EAAG T V+ Sbjct: 20 GRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKDYAIVNVDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |