CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.716e-14 Identity = 54/145 (37.24%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 373 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRK 795 GRGI +G+G + G G +GQ +R G + KGFEGGQMP++RR+PK G + +V +NL + I+A G ++ E+L K G + R K +++LG GEL K+N + S SA +E AG T+ +L K Sbjct: 20 GRGIGSGKGKTSGRGGKGQTARSGVRI-KGFEGGQMPMHRRLPK----RGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL----RRSKDGVRLLGRGELKAKINIEVYGASKSAIAAVEKAGGTVKILAPAK 155
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MYCPA (50S ribosomal protein L15 OS=Mycobacterium paratuberculosis GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G + G G +G K+R V FEGGQMP++ R+PKL+G +Y VN+ DI F +G V ++ L KG + R +K+LGDG+L+ K+ A FS SA+EK+ AAG ++T L Sbjct: 22 GRG-EGSKGKTAGRGTKGTKAR--KNVPVTFEGGQMPIHMRLPKLKGFRNRFRT---EYEIVNVGDINRL-FPQGGSVGVDELVAKGAVR-----RNSLVKVLGDGKLTVKVEVSAHKFSGSAREKITAAGGSVTEL 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MYCA1 (50S ribosomal protein L15 OS=Mycobacterium avium (strain 104) GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G + G G +G K+R V FEGGQMP++ R+PKL+G +Y VN+ DI F +G V ++ L KG + R +K+LGDG+L+ K+ A FS SA+EK+ AAG ++T L Sbjct: 22 GRG-EGSKGKTAGRGTKGTKAR--KNVPVTFEGGQMPIHMRLPKLKGFRNRFRT---EYEIVNVGDINRL-FPQGGSVGVDELVAKGAVR-----RNSLVKVLGDGKLTVKVEVSAHKFSGSAREKITAAGGSVTEL 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_GRAFK (50S ribosomal protein L15 OS=Gramella forsetii (strain KT0803) GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G+G + G +G KSR G + GFEGGQMPL RR+PK G + Y +N L+++ G ++ D V ++ L + GL +GR +KILG GEL KL F+ SAKE +EAAG + L Sbjct: 21 GRGEGSGKGGTATRGHKGAKSRSGYSKKIGFEGGQMPLQRRVPKF----GFTNRNRKVYQGINLDTLQNLVDEGRIK-DTVDMDVLVENGL---AGRNEL--VKILGRGELKAKLKISVHKFTASAKEAIEAAGGEVVTL 150
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_FRASC (50S ribosomal protein L15 OS=Frankia sp. (strain CcI3) GN=rplO PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = -3 Query: 391 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 795 GRG +G + G G +G K+R R FEGGQMPL+ R+PKL+G +Y VN+ + A F +G EV+ L +G + K P+K+LG+G+++ L+ A AFS SAKEK+ AAG ++T Sbjct: 35 GRG-EGSKGKTAGRGTKGSKARKQVPAR--FEGGQMPLHMRLPKLKGFRNRFRV---EYQVVNVATL-AELFPQGGEVTKADLAARGAVRG-----KSPVKVLGNGDINVALHVSADAFSASAKEKIAAAGGSVT 157
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BURXL (50S ribosomal protein L15 OS=Burkholderia xenovorans (strain LB400) GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 55/135 (40.74%), Postives = 73/135 (54.07%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGI +G G + G G +GQKSR G + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ E KI+ GEL +K+ K + A+ +EAAG Sbjct: 17 RRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLSDLEK---LPVDEIDLLALKQAGLVG----ELIKSAKIIATGELKRKVVVKGLGATKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BUCAK (50S ribosomal protein L15 OS=Buchnera aphidicola subsp. Acyrthosiphon kondoi GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQ+PLYRR+PK G V L ++ +EGD + L TLK ++ G + + +K++ GE+++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQIPLYRRLPKF----GFTSRKAMITAEVRLSEL---ALVEGDVIDLNTLKAANVV---GIQIEF-VKVILSGEVARPVTLRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ACICJ (50S ribosomal protein L15 OS=Acidiphilium cryptum (strain JF-5) GN=rplO PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = -3 Query: 376 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKD----IEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGR 795 GRGI +G+G + G G++GQK+R G + GFEGGQ+P+YRR+PK G + Y P+N+ IE+ G +++ TL+ G+ S + +++LG GE+S+K+ + S SA +E AG ++T R Sbjct: 20 GRGIGSGKGKTSGKGVKGQKAREGVSLN-GFEGGQLPIYRRLPK----RGFNNVNRKDYAPLNVGTLAALIESGKIDAGQKITEATLRAAGVYAGS---KLAGVRLLGRGEISQKVEIEVSGASASAIAAIEQAGGSVTTTVAR 155
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_SPHWW (50S ribosomal protein L15 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14 Identity = 58/159 (36.48%), Postives = 80/159 (50.31%), Query Frame = -3 Query: 331 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARA 795 GRGI +G G + G G +GQKSR G + GFEGGQMPL+ R+PK G + Y VNL K ++A + LK G+ R K ++ILG GEL+ K++FK S AK +E AG ++ V+ K + K A+A Sbjct: 20 GRGIGSGLGKTGGRGQKGQKSRSGVSIN-GFEGGQMPLHMRLPK----RGFNNIFAKDYAEVNLGAIQKLVDAKKLDTAGVIDHAALKAAGV----ARGGKDGVRILGKGELTAKVSFKVAGVSAGAKAAIEKAGGSVEVIEVVPAAEKAAAKKGTAKA 169
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_PASMU (50S ribosomal protein L15 OS=Pasteurella multocida GN=rplO PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14 Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V+LE+LK +I + +KI+ GE+ + + + AK +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRRLPKF----GFTSMKAAVTAEVRLNDLAK---VEGGVVTLESLKAANVITKDIQF----VKIILAGEVKGAVVVRGLRVTKGAKAAIEAAG 139 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |