CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MYCUA (50S ribosomal protein L15 OS=Mycobacterium ulcerans (strain Agy99) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G + G G +G K+R V FEGGQMP++ R+PKL+G +Y VN+ DI A F EG V ++ L KG + R+ L +K+LGDG+L+ K++ A FS SA+E++ AAG ++T L Sbjct: 22 GRG-EGSKGKTAGRGTKGTKAR--KQVPTTFEGGQMPIHMRLPKLKGFRNRFRT---EYEIVNVGDI-ARLFPEGGTVGVDELVAKGAV----RKNSL-VKVLGDGKLTVKVDITAHKFSGSAREQITAAGGSVTEL 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MANSM (50S ribosomal protein L15 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 51/131 (38.93%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G + L D+ +E + V+LE+LK +I + K+ L GE+ + + + AK +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRRLPKF----GFTSMKAAVTAEIRLNDLTK---VENNVVTLESLKAANIITKDIQFAKVVLA----GEVKGAVTVRGLRVTKGAKAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 53/145 (36.55%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 373 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRK 795 GRGI +G+G + G G +GQ +R G + KGFEGGQMP++RR+PK G + +V +NL + I+A G ++ E L K G + R K +++LG GE++ K+N + S SA +E AG T+ +L K Sbjct: 20 GRGIGSGKGKTSGRGGKGQTARSGVRI-KGFEGGQMPMHRRLPK----RGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL----RRAKDGVRLLGRGEITAKVNIEVHGASKSAIAAVEKAGGTVKLLAPAK 155
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BIFLO (50S ribosomal protein L15 OS=Bifidobacterium longum GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G + G G +GQ R VR GFEGGQ+PLY R+PKLRG ++ +N+ + F EG EV++ L KG + + P+K+LGDGE + K S SAK K+EAAG Sbjct: 26 GRG-EGSKGKTSGRGAKGQTKR--NHVRPGFEGGQLPLYMRLPKLRGFKNPFKV---EFQVINIARLVEL-FPEGGEVAVADLIAKGAVRDNA-----PVKVLGDGETTVAFTLKGVKASASAKSKIEAAG 144
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BIFLI (50S ribosomal protein L15 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rplO PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G + G G +GQ R VR GFEGGQ+PLY R+PKLRG ++ +N+ + F EG EV++ L KG + + P+K+LGDGE + K S SAK K+EAAG Sbjct: 26 GRG-EGSKGKTSGRGAKGQTKR--NHVRPGFEGGQLPLYMRLPKLRGFKNPFKV---EFQVINIARLVEL-FPEGGEVAVADLIAKGAVRDNA-----PVKVLGDGETTVAFTLKGVKASASAKSKIEAAG 144
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_POLSJ (50S ribosomal protein L15 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rplO PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKY-VPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRGI +G G + G G +GQKSR G + GFEGGQMP+ RR+PK G + L K+ V L +E G EV L LK GL+ + +K++ GELSK + + + AK +EAAG Sbjct: 17 RRVGRGIGSGLGKTAGRGHKGQKSRAGGYHKVGFEGGQMPMQRRLPK-----RGFKSHLLKFNAEVTLSALEQLGLA---EVDLLALKTAGLVGQLAKN----VKVIKSGELSKAVKLNGISATAGAKAIIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_NITWN (50S ribosomal protein L15 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplO PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = -3 Query: 373 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGD-EVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRK 795 GRGI +G+G + G G +GQ +R G + GFEGGQMPL+RR+PK RG + L+D AG ++ + ++ E+L K G++ R K +++LG GE+ KL + S SA +E AG T+ +L +K Sbjct: 20 GRGIGSGKGKTGGRGGKGQTARSGVRIN-GFEGGQMPLHRRLPK-RGFNNIFRVEFAEINLDRLQDAIDAGSIDANTTINAESLVKSGVV----RRAKGGVRLLGRGEIKAKLTVEVHGASKSAIAAVEKAGGTVKILAPKK 155
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_MYCMM (50S ribosomal protein L15 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=rplO PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG +G + G G +G K+R V FEGGQMP++ R+PKL+G +Y VN+ DI A F EG V ++ L KG + R+ L +K+LGDG+L+ K++ A FS SA+E++ AAG ++T L Sbjct: 22 GRG-EGSKGKTAGRGTKGTKAR--KQVPTTFEGGQMPIHMRLPKLKGFRNRFRT---EYEIVNVGDI-ARLFPEGGTVGVDELVAKGAV----RKNSL-VKVLGDGKLTVKVDVTAHKFSGSAREQITAAGGSVTEL 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_METS4 (50S ribosomal protein L15 OS=Methylobacterium sp. (strain 4-46) GN=rplO PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 57/139 (41.01%), Postives = 81/139 (58.27%), Query Frame = -3 Query: 391 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAA---GFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 795 GRGI +G+G + G G++GQK+R G + KGFEGGQMPL+RR+PK G + G VN+ I+ A G L+ V++E L G+++ R R +KILG GEL+ L F+ S SA +E AG ++T Sbjct: 20 GRGIGSGKGKTAGRGVKGQKARTGVAI-KGFEGGQMPLHRRLPK----RGFNNPGATDLNEVNVGRIQQAVDSGKLDPSAPVTVEALVAAGVVS---RVRD-GVKILGVGELTASLTFQVARASKSAVAAIEKAGGSVT 149
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ERWT9 (50S ribosomal protein L15 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplO PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQ SR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE+S + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQNSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAMVTAEVRLSDLAK---VEGGIVDLNTLKAANII---GIQMEF-AKVILSGEVSAPVTIRGLRVTKGARAAIEAAG 139 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |