CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO81 (50S ribosomal protein L15 OS=Escherichia coli O81 (strain ED1a) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO7I (50S ribosomal protein L15 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO5E (50S ribosomal protein L15 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO57 (50S ribosomal protein L15 OS=Escherichia coli O157:H7 GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO55 (50S ribosomal protein L15 OS=Escherichia coli (strain 55989 / EAEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO45 (50S ribosomal protein L15 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO27 (50S ribosomal protein L15 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_ECO24 (50S ribosomal protein L15 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQKSR G GVR+GFEGGQMPLYRR+PK G V L D+ +EG V L TLK +I G + + K++ GE++ + + + A+ +EAAG Sbjct: 20 GRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKF----GFTSRKAAITAEVRLSDLAK---VEGGVVDLNTLKAANII---GIQIEF-AKVILAGEVTTPVTVRGLRVTKGARAAIEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_DICNV (50S ribosomal protein L15 OS=Dichelobacter nodosus (strain VCS1703A) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQK+R G + GFEGGQMPL RR+PK RG G + + L +++ ++ + + L LK GL + ER + K+ +G +SK + + + S AK LEAAG Sbjct: 20 GRGIGSGLGKTSGKGHKGQKARSGGYHKVGFEGGQMPLQRRLPK-RGFRSLKKLGTAR---IRLSELQK---IDAEVIDLNALKAAGLAS----ERAVAAKVYLNGTISKAVTLRGVSISAGAKAALEAAG 139
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_DESDA (50S ribosomal protein L15 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rplO PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = -3 Query: 403 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLP-KYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 804 R GRG +G G + G G +GQ +R G GV GFEGGQMPL RR+PK G +A Y +NL + A F D ++L+ + +GL P+KIL GE+ L +A FS +A EK+ AG Sbjct: 17 RRVGRGSGSGLGCTAGKGHKGQNARAGGGVAPGFEGGQMPLQRRLPK----HGFKNAPFKVTYDVINLDRLLEA-FEGKDTITLDDIYARGLARMGA-----PVKILSRGEVKSALKVEAHKFSQTAAEKIRGAG 141 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |