CF835984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_BACST (50S ribosomal protein L15 OS=Bacillus stearothermophilus GN=rplO PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G G + G G +GQ +R G GVR GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ E L + G+I+ + K +KILG G++ KKL KA FS SAKE +EAAG Sbjct: 20 GRGIGSGNGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLEKLNR--FEDGTEVTPELLLETGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRGC (50S ribosomal protein L15 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplO PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK G ++ +Y VNL + A F +G EV+ L + G++ + K +KILG+GEL+KKL KA FS SA+E + A G ++ V+ Sbjct: 20 GRGTSSGNGKTAGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFLNVNRKEYAIVNLDQLNA--FEDGAEVTPVVLVESGIV----KAEKSGVKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CLOTH (50S ribosomal protein L15 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplO PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 63/140 (45.00%), Postives = 84/140 (60.00%), Query Frame = -3 Query: 385 RERGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 804 + +GRG G G + G G +GQ +R G GVR GFEGGQMPLYRR+PK G + Y VN+ + A F +G V+ E LK+KG+I ++ + ILG+GEL KKL KA FS +A EK+EAAG + V+ Sbjct: 17 KRKGRGHGTGNGKTAGRGHKGQNARSGGGVRPGFEGGQMPLYRRVPK----RGFTNIFSKVYTEVNVSALNA--FDDGTVVTQELLKEKGII----KKINDGVVILGNGELKKKLTVKAARFSKTAAEKIEAAGGKVEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_CARHZ (50S ribosomal protein L15 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplO PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = -3 Query: 385 RGRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 798 +G+GI +G G + G G +GQK+R G GVR GFEGGQMPLYRR+PK G H K + +N+ + F +G V+ E L + G+I G +KILG GEL K L KA AFS SAKEK+ AAG VL Sbjct: 19 KGQGIGSGLGKTAGRGQKGQKARSGGGVRPGFEGGQMPLYRRLPK-----RGFHNKFAKEIIAINVDRLNK--FEDGTVVTPELLLETGIIKKIGD----GVKILGGGELKKALTVKAHAFSESAKEKITAAGGQAEVL 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRU0 (50S ribosomal protein L15 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rplO PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.294e-21 Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQKSR G GVR GFEGGQ PL+RR+PK G + +Y VNL + F +G EV+ LK+ G++ R K +KILG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 20 GRGTSSGNGKTSGRGQKGQKSRSGGGVRLGFEGGQTPLFRRMPK----RGFSNINTKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_GEOSW (50S ribosomal protein L15 OS=Geobacillus sp. (strain WCH70) GN=rplO PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.294e-21 Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRGI +G+G + G G +GQ +R G GVR GFEGGQ PL+RR+PK G + +Y VNL + F +G EV+ E L + G+I+ + K +KILG G++ KKL KA FS SAKE +EAAG Sbjct: 20 GRGIGSGKGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAIVNLDKLNR--FEDGTEVTPELLLETGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_LISW6 (50S ribosomal protein L15 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplO PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.996e-21 Identity = 61/131 (46.56%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 403 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 795 GRG +G G + G G +GQK+R G GVR GFEGGQ+PL+RRIPK G + ++ VNL + F +G EV+ E L + G+I R K +KIL DG + KKL KA FS +AKE +EAAG Sbjct: 20 GRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLIESGII----RNEKSGIKILSDGNIEKKLTVKANKFSAAAKEAIEAAG 140
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRT2 (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rplO PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.912e-21 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQK+R G G+R GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ LK+ G+I R K +K+LG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 20 GRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLEQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRT1 (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rplO PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.912e-21 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQK+R G G+R GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ LK+ G+I R K +K+LG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 20 GRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLEQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835984 vs. ExPASy Swiss-Prot
Match: RL15_STRSV (50S ribosomal protein L15 OS=Streptococcus sanguinis (strain SK36) GN=rplO PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.912e-21 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 385 GRGIAAGQGNSCGFGMRGQKSRFGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 795 GRG ++G G + G G +GQK+R G GVR GFEGGQ PL+RR+PK G ++ +Y VNL + A F +G EV+ L + G++ + K +KILG+GEL+KKL KA FS SA+E + A G ++ V+ Sbjct: 20 GRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFLNINRKEYAIVNLDQLNA--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146 The following BLAST results are available for this feature:
BLAST of CF835984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835984 ID=CF835984; Name=CF835984; organism=Citrus sinensis; type=EST; length=806bpback to top |