CF835985
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNR3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain RCC307) GN=rplO PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26 Identity = 71/148 (47.97%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 189 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 L +L PQ G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ ++ VN+ E A G V+ ++L G++ K LK+LGDGEL KL A AF+ SA+EK+EAAG Sbjct: 5 LQSLKPQKGARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFT---LVNPKRFTVVNVG--ELAELKAGTVVTRDSLTEAGILT----SPKHALKVLGDGELKVKLTVHAAAFTASAREKIEAAG 143
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.211e-26 Identity = 69/148 (46.62%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 189 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KGLI + K PLKILG+G+++ KL +A +F+ AK+K+E AG Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHSFTKVAKQKIEDAG 143
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.211e-26 Identity = 70/149 (46.98%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 189 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 L++L P G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L L ++ + L EG V+L++L G++ K PLK+LG+G L KL +A AF+ SAK K+E AG Sbjct: 6 LDSLKPNKGARKRKTRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNGNLKVKLVVQAAAFTASAKTKIEGAG 144
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNS9 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9902) GN=rplO PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25 Identity = 77/162 (47.53%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PKYVPV----NLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELS-KKLNFKARAFSTSAKEKLEAAGCTLTVL 650 RL++L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L PK+ V LKD++ +G V+L++L G++ K PLK+LG+GEL+ K L +A AF+TSA+ K+EAAG T L Sbjct: 4 RLDSLKANKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALKDLK-----DGATVNLDSLVKDGIVT----SPKHPLKMLGNGELTVKNLTVQASAFTTSARTKIEAAGGTCETL 150
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNSC (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9605) GN=rplO PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.401e-25 Identity = 73/157 (46.50%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKNKGLINPS*RERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 RL++L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L G++ K PLK+LG+GEL +KKL +A AF++SA K+EAAG T +L Sbjct: 4 RLDSLKSNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNDLKDGSTVNLDSLVKDGIVT----SPKHPLKMLGNGELTAKKLTVQAAAFTSSALTKIEAAGGTCDIL 150
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNPX (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH8102) GN=rplO PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.322e-25 Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKNKGLINPS*RERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAG 632 RL +L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L G++ K PLKILG+G+L +KKL +A AF+ SA+ K+EAAG Sbjct: 5 RLESLKANKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVKDGVVT----SPKHPLKILGNGDLTAKKLTVQAAAFTASARTKIEAAG 145
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_PROM5 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplO PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.078e-25 Identity = 73/155 (47.10%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 189 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ Y VNL + + F + + V++++L K K L P K PLKILG+G + KL +A AF+ A+EK+E+AG + VL Sbjct: 5 LNTLKSNLGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNYSIVNLSKL--SEFKDNEIVNIDSLVKKKLLFKP-----KFPLKILGNGVVKVKLKVQAHAFTKVAQEKIESAGGSCEVL 149
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_CYAA5 (50S ribosomal protein L15 OS=Cyanothece sp. (strain ATCC 51142) GN=rplO PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24 Identity = 68/151 (45.03%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR--GIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 R++ + PQ GS I+AGQG S GFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ + H Y +N+ + + EV+LE+L GLI PLK+LG+GEL+ L +A F+ SAK K+E+AG Sbjct: 2 RIHEVNPQKGSTKRRRRIGRGISAGQGASGGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFPLVNPSH-----YTIINVGKLNSLS--PNTEVTLESLMEVGLIT----SNDGPLKVLGNGELTVPLTVRAPKFTASAKAKIESAG 141
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24 Identity = 71/152 (46.71%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 R +L PQ GS IAAGQG S GFGMRGQKSRSG R GFEGGQ PLYRR+PKL+ H L K Y +N+ + V++++L G++ + K PLK+LGDGEL+ KL A AFS SA+ K+EAAG Sbjct: 2 RFQDLHPQAGSRRRKRRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_PROMT (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL2A) GN=rplO PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 67/149 (44.97%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 +L +L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L +G++ + K PLKILG+G+L KL +A AF+ SAK K+E G Sbjct: 4 KLESLQSNKGSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGKLEVKLTVQAAAFTASAKNKIEEVG 143 The following BLAST results are available for this feature:
BLAST of CF835985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835985 ID=CF835985; Name=CF835985; organism=Citrus sinensis; type=EST; length=661bpback to top |