CF835994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.310e-51 Identity = 94/161 (58.39%), Postives = 119/161 (73.91%), Query Frame = -1 Query: 186 REVGAASSDYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 656 RE G+ DY P+ +PC KY+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG+ + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ Sbjct: 155 REQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLL 314
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.324e-51 Identity = 94/161 (58.39%), Postives = 119/161 (73.91%), Query Frame = -1 Query: 186 REVGAASSDYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 656 RE G+ DY P+ +PC KY+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG+ + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ Sbjct: 155 REQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLL 314
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50 Identity = 93/161 (57.76%), Postives = 121/161 (75.16%), Query Frame = -1 Query: 183 EVGAASSDYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 653 E+GA +S Y P+ +PC KY+GRGPIQL++N NY GEA+G DLLNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI +W PS+ ++ AGR+PGYG+ TNIINGG+ECG+ +D V NRIGF+ +C GI G NLDC +QRP+ L A Sbjct: 173 EIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.243e-50 Identity = 91/153 (59.48%), Postives = 116/153 (75.82%), Query Frame = -1 Query: 186 DYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 632 DY P+ +PC KY+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VII W PS+ + A RLPG+G+ TNIINGG+ECG ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ Sbjct: 172 DYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALL 324
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.065e-49 Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 201 PNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 620 P +PC KYYGRGPIQ+T+N NY G+A+G DLLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA++ AGR+PGYG TNIINGG+ECG+ +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 176 PEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 88/147 (59.86%), Postives = 111/147 (75.51%), Query Frame = -1 Query: 186 PNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 620 P +PC +YYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG + V++RIGFF +C G+ G+NLDC +Q P+G +L+ Sbjct: 174 PQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLL 320
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49 Identity = 88/146 (60.27%), Postives = 110/146 (75.34%), Query Frame = -1 Query: 189 PNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 620 P +PC +YYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG + V++RIGFF +C G+ G+NLDC +Q P+G +L Sbjct: 173 PQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 318
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.047e-49 Identity = 87/150 (58.00%), Postives = 112/150 (74.67%), Query Frame = -1 Query: 201 SSDYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 638 SS+Y P+ +PC YYGRGP+QL+WN NY +CG A+G DLLNNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS + AGR+PGYG+ TNIINGG+ECG + V +RIGF+ +C G+ PG NLDC NQR + Sbjct: 162 SSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.285e-49 Identity = 86/147 (58.50%), Postives = 111/147 (75.51%), Query Frame = -1 Query: 180 YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQ 614 +PC KYYGRGPIQ+++N NY CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI W PSA + A RLPGYG+ TNIINGG+ECG+ + V++RIGF+ +C G+ PGDN+DC NQ+ + L+ + Sbjct: 186 WPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLE 332
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48 Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = -1 Query: 201 SDYGDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 635 SDY P+ +PC KYYGRGPIQL++N NY G A+GVDLL+NPDL+ATD +SFK+A+WFWMT Q KPS H+VI W PS + AGR PGYG+ TNI+NGG+ECG+ +D V NRIGF+ +CG FGI G NLDC NQRP+ Sbjct: 181 SDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329 The following BLAST results are available for this feature:
BLAST of CF835994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835994 ID=CF835994; Name=CF835994; organism=Citrus sinensis; type=EST; length=659bpback to top |